Pseudoalteromonas phenolica: PP2015_2082
Help
Entry
PP2015_2082 CDS
T04165
Name
(GenBank) FimV N-terminal domain protein
Organism
pphe
Pseudoalteromonas phenolica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
LysM
MbeD_MobD
Motif
Other DBs
NCBI-ProteinID:
ALO42580
UniProt:
A0A0S2K3D2
LinkDB
All DBs
Position
I:complement(2395199..2400937)
Genome browser
AA seq
1912 aa
AA seq
DB search
MRGLVFICFFAFALITIPAYTQEGTILKGPKNADYGQMGRSIGPIKPSDTLWRIAQKVRP
DDGSVTVYQVMSALYRKNPNAFLDKNLNHMRDGAYLKIPTIAEMRRENPAIAKQRSDQDD
DLWELKKSGMLDNQTIEEAQKKVTQARKIDVDNAQQQLTSQLKSLQMEQDAKLQELQSQF
KNSVRSVEEILEENNKLKGQLTNISEELQNVRNQLGQDSEIQQQLQSVIELQNALIERQR
AQQQEEQSADLLSNPVMIGLLATLPALLVIGGLVMFLRKRKNANDADDEDDFLPQAPAAA
GAAGVAGAAAADPLDLDVPPLDSSVPVEDSVQLDDDILPEDDDMMFDSLEDDSFESGNDT
LDQDELDSLLSDDVAFDDGSDSDDLDDFLQQNFDADDSLDDMVDLDGDGSASGDDILSSD
DLDDLFNESDDSSDDELDVSDDALAALSEELATEQQEDVDIDSILDEASTDDSGNDNDDF
DLDDIDSLIDEAGDQPPKDENSEGTDEDFDLDDIDNLLDEVAQTDEPAVEIAEDDFDVDD
IDDLLDEVGDSAEDISTPSDEQLVDADDIDSLLESAEEEGLDTDDIDGLLDKVQDQDSSE
VENTAEDNFDIDDLIAESNQDGLLVEAEPNEQDEVKEDDIALDDLDELLEEDVVNDTPSD
EESDLDLDLDDLMDEPDENLIDEEQDDNPVEAEPNEQNEVKEDDIALDDLDELLEEDIVN
DTPSDEEGDLDLDLDDLMDESESDENLNDEIQDDNSGEAEPIEQDEVEEDDIALDDLDEL
LEEDIVNDTPSDEEGDLDLDLDDLMDESESDENLNDEIQDDNSGEAEPSELDEVEEDDIA
LDDLDEQLEEDIANDTPSDEESDLDLDLDDLMDEPESDENLIDEIQDDIPVEAEPSELDE
VEEDNIALDDLDEQLEEDIANDTPSDEESDLDLDLDDLMDESDENLIDEVQDDIPVEAEP
SEQGKVQEGVVNDTPSDEGSDLDLDLDDLMDESESDENLNDEIQDDIPVEAELNEQDEVE
EDDIALDDLDELLEEDIANDTPSDEESDLDLDLDDLIDEPDENLIDKEQDDNPVEAELNE
QDEVEENDIALDDLDELLEEDEANEELRSELENLADENEVEEPKSIEQSIVDELNAMNQH
FSDDIEDEIPVEPEIRTPQEPLKSVDEMLEELESEEEWHSGESYDGELDLGDDPLSDDID
LASEEELPEIDTVTPSAELDSYPELDLDEELDEDVLNISETEQALSQALEAGNTASNDLD
DDLLTDDELSFEDVLGTNLESKNDPFEADIESSEQITQEQPNVAIEEEIADSEDGFDKDA
VLDSVTEDQVLEIQDSPAKEEALQEEVESAFEDELPADTIEDELEIEDFPEFDEEAALEA
ATEEQALEVQDSPAPEEALQEEVESAFEDELPADTIEDELEIEDFPEFDEEAALEAATEE
QALEVQDTPAPEEALQEEVESAFEDELPADTIEDELEIEDFPEFDEEAALEAATEEQALE
IQDSPAPEEALQEGVESPFEDELPTDTIEDELEIEDFPEFDEEAALEAATEEQALEVQDA
PAPEEALQEEVESPFEDELPTDTIEDELEIEDFPDFDEEAALEAATEEQALEVQDAPAQE
ETVQEETAPSIEEDLLAESIENELEIEEFPEFDEGDALEAVTEEQALEIQDTPVQQEAVL
REDSELPSDQTSIDDRIEDEFEGDILTDIEEISPDAFLNELDDLASNEEAESHVEQNIDE
TAIEDQFMSEISDTDFDALLNDLAEPEPIDTESLDEVELNFDTLLNEELNKDLGTLDVAI
ESDDEVSQPDVEEYLEIDDLLAESDDFEAEEEPYQEANMDVGLGDFDDLLAGENAPDVDL
EADGFSAKLDLARAYIEIDDSESALAIIEEVINAGPESVQAEASSLRDKIQS
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtttagtgtttatttgtttctttgcatttgcattgataaccataccagcctat
acacaagaaggtactattttaaagggccccaaaaatgccgattatggtcaaatgggtcgc
tctatcggcccgataaaaccttcggatactttgtggcgaatcgcgcaaaaagttaggcct
gatgacggttctgttactgtgtaccaagtaatgagtgccctttatcgcaaaaaccccaat
gcttttttagataaaaacctcaatcacatgcgcgatggcgcataccttaaaataccgacc
attgctgaaatgcgtcgtgaaaaccctgccatagcaaagcagcgttctgatcaagacgat
gacttgtgggagctaaaaaagagcggcatgctcgacaaccaaaccatcgaagaagcgcaa
aagaaagttacgcaagcacgaaaaatcgatgttgataatgcacaacagcaacttacttcg
caacttaagtcattgcaaatggagcaagatgctaagctacaggagctacaatcacaattt
aagaactctgttcgcagtgttgaagaaatactagaagaaaacaacaagctaaaaggtcag
cttacgaacatttctgaagagctacaaaacgttcgtaaccagcttgggcaagattctgaa
attcagcaacagctgcagtcggtcatcgaacttcaaaatgctttgattgaacgtcaaaga
gcacagcaacaagaagaacaaagcgctgatttactctcaaacccagtgatgattgggttg
ttggcaactttaccagctttattagtgattggtggtttagtcatgttcttacgtaaacga
aagaatgccaatgacgctgatgacgaagatgattttctaccccaagcgccagctgcagca
ggagccgcaggagtcgcaggtgcagcagcggctgatccattggacttagatgtaccgccg
ttagatagcagcgtaccagttgaagatagcgtgcagctagacgatgacattttgcctgaa
gatgacgacatgatgtttgattctttagaagatgatagcttcgagtcaggcaacgatact
ttagatcaagatgaactagatagccttttaagtgatgatgtcgcgtttgatgatggttca
gatagtgatgatctagatgattttttacagcaaaactttgatgctgacgactctctagat
gacatggtcgatttagatggcgatggcagtgctagcggtgatgatatcttgagctctgat
gaccttgatgatttatttaatgagtctgacgactcttctgatgatgagttagatgtcagt
gatgatgccttagcagcactaagtgaagaattagcaaccgaacaacaagaagatgttgat
attgattcaattctagatgaagcgtctacagatgactcaggaaatgataatgatgatttc
gatctagatgatattgacagtttgatcgatgaggctggcgaccagcccccaaaggatgaa
aactctgaaggaacagatgaagacttcgatttagatgacatagataatcttcttgacgag
gttgcgcaaaccgatgagccagcggtagaaattgccgaagatgatttcgatgttgacgat
atagatgacctgcttgatgaagtaggagactctgcagaagatatttctactccatctgat
gaacaactcgttgatgctgacgacattgatagtctgctagaaagcgccgaagaggaaggc
ctcgatactgatgatatagacggtcttctagataaagttcaagaccaagatagttcagaa
gtcgaaaatacagcagaagataattttgacatagacgatttaatagcagagtcaaatcaa
gatggccttcttgttgaagctgaaccaaatgaacaagatgaagtaaaagaagacgacatt
gcacttgatgatttagacgagctgcttgaagaagacgtagtaaacgacacaccgtcggat
gaagaaagtgacttagatttagatctcgacgacttaatggacgagccagacgaaaacctc
atcgatgaagagcaagatgataatcctgttgaagctgaaccaaatgaacaaaatgaagta
aaagaagacgacattgcacttgatgatttagacgagctgcttgaagaagacatagtaaac
gatacaccgtcggatgaagaaggtgacttagatttagatcttgacgacttaatggacgag
tcagagtcagacgaaaatctgaacgatgaaattcaagatgataattctggtgaagctgaa
ccaattgaacaggatgaagtagaagaagatgacattgcacttgatgatttagacgagctg
cttgaagaagacatagtaaacgacactccgtcggatgaagaaggtgacttagatttagat
cttgacgacttaatggacgagtcagagtcagacgaaaatctgaacgatgaaattcaagat
gataattctggtgaagctgaaccaagtgaactggatgaagtagaagaagatgacattgca
cttgatgatttagacgagcagcttgaagaagacatagcaaacgacacaccgtctgatgaa
gaaagtgacttagatttagatcttgacgacttaatggatgagccagagtcagacgaaaac
ctaattgatgaaattcaagatgatattcctgttgaagctgaaccaagtgaactggatgaa
gtagaagaagacaatattgcacttgatgatttagacgagcagcttgaagaagacatagca
aacgacacaccgtctgatgaagaaagtgacttagatttagatctagacgacttaatggac
gagtcagacgaaaacctaatcgatgaagttcaagatgatattcctgttgaagctgaacca
agtgaacagggtaaagtacaagaaggcgtagtaaacgacacaccgtcggatgaaggaagt
gacttagatttagaccttgatgacttaatggacgagtcagagtcagacgaaaatctgaac
gatgagattcaagatgatattcctgttgaagctgaactaaatgaacaggatgaagtagaa
gaagatgacattgcacttgatgatttagacgagctgcttgaagaagacatagcaaacgac
acaccgtcggatgaagaaagtgacttagatttagatctcgacgacttaatagacgagcca
gacgaaaacctcatcgataaagagcaagatgataatcctgttgaagctgaactaaatgaa
caggatgaagtagaagaaaatgacattgcacttgatgatttagacgagttgcttgaagaa
gacgaagcaaacgaagagttgagatcggagcttgaaaatctagctgatgagaatgaggtc
gaagaacccaagtcaattgagcaaagcattgttgatgaactcaacgcgatgaatcagcat
ttttcagatgacatcgaagatgaaattcccgttgagccagaaattcgaacaccacaagag
ccattgaagagtgttgatgaaatgctcgaagagcttgaatcagaggaagaatggcacagt
ggtgagagttatgacggagaacttgatcttggtgatgatccactttcagatgatattgat
ttagcttctgaggaagagttacccgaaatagatacggtgacgccaagcgctgagttagac
agttatcctgaattagatctagatgaagaactggatgaagatgtcctcaatatcagtgaa
actgaacaagcgctctctcaagctttagaagctggtaacactgcgagcaatgatcttgat
gatgacttgcttactgacgatgagctttcttttgaagatgttttaggtacaaacttagag
tctaaaaatgatccttttgaagctgatatagagtcatctgaacaaataacacaagagcaa
ccaaacgtagcaattgaagaagaaatagctgactctgaagatggttttgacaaagacgct
gtattagattctgttacagaagatcaagttctagaaattcaagattcaccagctaaagaa
gaagcacttcaggaagaagttgagtcggcttttgaagatgagttaccagctgataccatc
gaagatgagttagaaatcgaagacttccctgagtttgacgaagaggctgcactagaagct
gcaacagaagaacaagcattagaagttcaagattcaccagctccagaagaagcacttcag
gaagaagttgagtcggcttttgaagatgagttaccagctgataccatcgaagatgaattg
gaaatcgaagactttcctgagtttgacgaagaggctgcactagaagctgcaacagaagaa
caagcattagaagttcaagatacaccagctccagaagaagcacttcaggaagaagttgag
tcggcttttgaagatgagttaccagctgataccatcgaagatgaattggaaatcgaagac
tttcctgagtttgacgaagaggctgcactagaagctgcaacagaagaacaagcgctagaa
attcaagattcaccagctccagaagaagcacttcaggaaggagttgagtcgccttttgaa
gatgagttaccaactgacaccatcgaagatgaattggaaatcgaagactttcctgagttt
gacgaagaggctgcactagaagctgcaacagaagaacaagcgctagaagttcaagatgca
ccagctccagaagaagcacttcaggaagaagttgagtcgccttttgaagatgagttacca
actgacaccatcgaagatgaattggaaatcgaagactttcctgactttgacgaagaggct
gcactagaagctgcaacagaagaacaagcgctagaagttcaagatgcaccagctcaagaa
gaaacagttcaggaagaaactgcaccatctattgaagaggacttactagctgagagcatt
gagaatgagcttgaaatcgaagaatttcctgagtttgatgaaggtgacgcactagaggca
gttactgaagagcaagcgttagaaattcaagatacaccggttcaacaggaagccgttcta
agggaagattctgagctaccaagtgaccaaacgtcaattgatgaccgtatcgaggatgag
tttgagggcgatattttaacagatattgaagaaatatctccagatgcgtttttaaatgaa
ctcgatgatcttgctagcaacgaagaagcggaatcgcatgttgagcaaaatattgacgaa
acggcgatagaagatcagtttatgtcagagatatctgatactgacttcgacgcgttgttg
aatgacttagctgaaccagagccaatcgatacagagtctttagacgaggtagaacttaat
ttcgataccttgctaaacgaagagttaaataaagatcttggaactttagatgttgcgatt
gaaagcgatgatgaggtttctcagccagacgttgaagaatatttagaaattgacgactta
cttgcagaaagtgatgactttgaagcagaagaagagccttatcaagaagcgaatatggat
gttggtttaggtgattttgatgacttgcttgcaggcgaaaatgcccctgatgttgattta
gaagccgacggtttttctgcaaaactagatttagccagagcatatattgaaattgatgac
agtgagagtgcactcgccattatcgaagaagtgatcaatgcagggcctgaatcagtccaa
gctgaagcgagctcactaagagacaaaatacagtcctaa
DBGET
integrated database retrieval system
