Pseudoalteromonas phenolica: PP2015_217
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Entry
PP2015_217 CDS
T04165
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP2015_217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_217
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP2015_217
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PP2015_217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_23
nSTAND3
DnaJ_CXXCXGXG
AAA_25
NACHT
Viral_helicase1
cobW
NTPase_1
MMR_HSR1
DUF2972
Motif
Other DBs
NCBI-ProteinID:
ALO40744
UniProt:
A0A0S2JXJ6
LinkDB
All DBs
Position
I:complement(248971..251790)
Genome browser
AA seq
939 aa
AA seq
DB search
MDNIEVRGARTHNLKNISLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PTHDLPLAAQTISQMVDTVLEQPEGSKLMLLAPVVKNRKGEHVKLFEQLSAQGYIRARVD
GEVCDLSDPPTLELHKKHTIEVVVDRFKVKDGLQQRLAESFETALELSGGVAVVANMDDT
EQAELTFSANFACPTCGYAMTELEPRLFSFNNPAGACQSCDGLGVRQYFDPSRVVQNPEL
SLSGGAIKGWDKRSFYYFQMLQSVAEHYEFDLEVPFEKLSKDAQKVVLEGSGKTKIAFNY
RNDRGDVITRNHEFEGVLNNMSRRYRETESSSVREELAKYQTNQACPSCNGSRLREEARH
VFIGKTTLPDVTLMSIGDAMTFFDELELTGQRAQIAEKILKEIRDRLSFLINVGLNYLSL
ERSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNDRLLSTLTHLRDLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGHVVAQGSRDDILNSPESLTGQYLSGAKAIVV
PEQRHQPEDKWLELFGATGNNLKNVDLRIPFGLMTCITGVSGSGKSTLINDTLFKLAHTA
LNGATTAEPAPHKDIQGLKHFDKVIDIDQSPIGRTPRSNPATYTGIFTAIRELFAGTQEA
RSRGYKVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCSGKRYNRETLEVLYK
GKNIHEVLEMTVEDAREFFDKIPAISRKLQTLMDVGLTYIRLGQAATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLAVLHRLRDHGNTIVVIEHNLDVIKTADWI
VDLGPEGGAGGGQILISGTPEAVAECDASHTGRYLKPLL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggataatatagaagtaagaggcgcccgcacccataacctgaagaatatttcactgact
attccacgtgataaactgattgttatcactgggttatctggttcaggtaaatcctctctc
gcgttcgatactttatatgccgaaggccaacgtcgttatgtcgaatcgctttcagcttat
gcgcgccaatttttatctttgatggaaaagcccgatgtagatcatattgaaggtctgtca
cctgccatttctattgagcaaaaatcgacatctcacaaccctcgctctactgtcggtacg
attactgaaatatacgattacctacgattgctatttgcgcgtgttggtgaacctcgctgt
ccgactcatgatttacctttggcagcacaaaccatcagccaaatggtcgatactgttttg
gagcaacctgaaggtagcaagctgatgctgttagcgcctgtggtaaaaaatcgtaagggt
gaacacgtcaaactattcgagcaattgagtgctcaaggctacattcgcgcccgtgttgat
ggtgaagtctgtgatttaagcgatccaccgactttagaattacataaaaagcatactata
gaagtagttgttgaccgctttaaagtaaaagatggcttgcaacaacgtttggcagagtca
ttcgagaccgccttagaattatcgggtggtgtggctgttgttgcgaatatggacgataca
gaacaagcagagcttactttctctgctaactttgcctgtccgacttgtggctatgcgatg
actgaactagagcctcgtttattttcattcaacaacccggctggtgcttgccaaagctgt
gacggcttaggtgtaagacaatacttcgacccaagtcgcgtggtgcaaaatcctgaactt
agtttaagtggcggtgcaattaaaggctgggacaaacgcagcttctattacttccaaatg
ctgcaatctgtggctgagcattatgagtttgacttagaagtcccttttgaaaaattatct
aaagacgcgcaaaaagttgttctagaaggctcgggtaaaaccaaaattgcttttaactat
cgcaatgaccgcggtgatgtaatcacccgtaatcacgaattcgaaggcgtactaaataat
atgagtcgtcgttatcgtgaaactgaatccagctctgttcgtgaagagcttgccaagtat
caaaccaatcaagcctgtcctagctgtaatggctcgcgtttgcgtgaagaagcacgtcac
gtgtttattggcaaaacaacacttcctgatgtgacattaatgagcattggtgatgcgatg
actttcttcgatgagttagagcttacagggcaacgtgcacaaatcgctgaaaaaatctta
aaagagatccgtgaccgtttatctttcttaatcaatgttggtttgaactatttatcacta
gagcgtagtgccgataccctttcaggcggtgaagcgcagcgtattcgtcttgccagtcaa
attggtgcaggcctcgttggtgttatgtatgtgctagacgaaccgtcaattggtcttcat
caacgcgataacgaccgtttgcttagcacgttaactcatctacgtgacttaggtaatacc
gtaattgtggttgagcacgacgaagacgccattcgcgcggctgatcatattatcgatatc
ggcccaggtgcaggtgtacatggcggtcatgttgttgcacaaggttcacgtgacgatatt
cttaattcacctgagtctttaacaggtcagtatttaagtggtgcaaaagccattgtcgta
cctgagcaacgccaccagccagaagataaatggctagaactctttggcgccacaggtaat
aatttaaaaaatgtcgacctgcgtattccatttggcttaatgacctgtatcaccggcgta
tcaggttcgggtaaatcaacccttattaatgacacgctatttaagctggctcacacagcg
ctgaatggagcgaccacggctgagcctgcccctcacaaagacattcaaggccttaaacat
ttcgataaagtgatcgacattgaccaaagcccaataggccgtacaccgcgttcaaaccct
gcaacctatacaggtatctttacggctattcgtgaattatttgcgggcacacaagaagcg
cgctctcgtggctataaagtgggtcgtttcagctttaacgtaaaaggcggtcgttgtgaa
gcgtgtcagggcgatggcgttatcaaagtagaaatgcacttcttacctgacgtatacgta
ccatgtgatgtgtgttcaggtaaacgctataaccgtgaaaccttagaagtactttataaa
ggcaaaaacatccacgaagtactagaaatgacggttgaagatgctcgtgaattcttcgat
aaaatcccagcgatcagtcgtaagctgcaaaccttaatggatgtaggcctgacttatatt
cggttggggcaagcagctactacgctttctggtggtgaagcgcagcgtgtgaaactcgct
agagagttatctaagcgcgataccggtaagactttatatattttggacgagccgaccaca
ggtttgcacttccacgatattcagcaattactggcggtacttcatcgcttgcgcgaccac
ggtaataccatcgtagtgattgaacacaatctcgatgtgataaaaaccgcagattggatt
gtcgacttaggtcctgaaggcggtgccggtggtggccaaattcttatctctggcacacct
gaagccgttgctgaatgtgacgcatcacatacgggtcggtatttaaaacccttgctttag
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