Pseudoalteromonas phenolica: PP2015_23
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Entry
PP2015_23 CDS
T04165
Name
(GenBank) Zn-finger domain associated with topoisomerase type I
KO
K07479
putative DNA topoisomerase
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PP2015_23
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GFIT
Motif
Pfam:
Zn_ribbon_Top1
DNA_ligase_ZBD
Zn_ribbon_recom
DUF325
Ribosomal_S27
CoiA_N
HVO_2753_ZBP
Lar_restr_allev
Zn_ribbon_PADR1
Zn_Ribbon_1
Toprim_C_rpt
DUF3268
Zn_ribbon_ACC
Zn_ribbon_PaaD
A2L_zn_ribbon
zf-CCHC_5
Motif
Other DBs
NCBI-ProteinID:
ALO40553
UniProt:
A0A0S2JX22
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Position
I:28005..28571
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AA seq
188 aa
AA seq
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MSKIDHSLFNADKHALEKEYEICPKCGSELVMKHSKNGPFLGCANYPACDYIRSLAQHDN
HDIKVLDDSPCPDCGEPLVIRNGRYGMFIGCTGYPACHFIVHEDEPEEEGLPNCPKCKKG
KLVVRNNKFGKQFYSCDAYPNCKYSLNQHPVDETCPQCGWGVMVEKSRGDKAVLQCPQKS
CQHKVEKS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagattgatcattctttatttaatgctgataaacatgcattagaaaaggaatat
gaaatttgtcctaaatgtggctctgagctggtgatgaagcacagcaaaaatgggccattt
ttgggttgtgccaattaccctgcgtgtgactatattcgctctctcgcccagcatgataat
cacgacatcaaagtactcgacgactcaccgtgtcctgactgtggggagcctttggttatt
cgcaatggtcgttacggtatgtttatcggatgtactggataccctgcctgccattttatt
gtgcatgaagacgaacccgaagaagaagggttaccaaactgccctaaatgtaaaaagggt
aagctcgttgttcgtaacaataaattcggtaaacaattctactcctgtgatgcctaccca
aattgtaagtacagtttgaatcaacacccagtcgatgagacttgcccgcaatgtggttgg
ggggtgatggttgagaaatctcgtggcgataaagctgtgttacaatgcccgcagaaatcc
tgccaacataaagtagagaaatcatag
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