Pseudoalteromonas phenolica: PP2015_252
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Entry
PP2015_252 CDS
T04165
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PP2015_252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphe03019
]
PP2015_252
03009 Ribosome biogenesis [BR:
pphe03009
]
PP2015_252
Messenger RNA biogenesis [BR:
pphe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PP2015_252
Ribosome biogenesis [BR:
pphe03009
]
Eukaryotic type
Pre-60S particles
RNases
PP2015_252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALO40779
UniProt:
A0A0S2JXK0
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All DBs
Position
I:293686..294231
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AA seq
181 aa
AA seq
DB search
MSFNESNLIWLDLEMTGLEPKTDKILEIATVITDGDLNVLAEGPVIAIHQSDELLDNMDE
WCTNQHGRSGLTARCKASKFTEDDAIAQTLEFLKEWVPPGSSPMCGNSIGQDRRFLNKYM
PELEAYFHYRNLDVSTVKELARRWKPELLGQVKKKSSHLALDDIKDSIMELKVYKEKFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaatgaatcaaatttgatctggctagatcttgaaatgacgggcttagagcct
aaaacagataaaatcttagaaattgctacagttattactgatggtgatttaaatgtatta
gctgaaggccctgttattgctattcatcaaagcgatgagttgttagataacatggacgaa
tggtgtaccaatcaacacggtcgttcaggtttgacagcacgctgtaaggccagtaagttc
actgaagacgatgccattgcacaaactttagagtttttaaaagagtgggtaccaccaggc
agttcgcctatgtgtggcaattcaattggtcaagaccgccgctttttaaataagtatatg
cctgaacttgaggcttactttcactatcgcaacctagatgtgagtacagtgaaagagcta
gctcgtcgttggaaaccagaattactaggtcaagttaaaaagaaaagctcacaccttgca
ctagacgacataaaagattcaataatggaattaaaggtttataaagaaaagttctttaat
ctttaa
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