Pseudoalteromonas phenolica: PP2015_2596
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Entry
PP2015_2596 CDS
T04165
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP2015_2596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_2596
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP2015_2596
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PP2015_2596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
AAA_5
DUF87
Kinesin
ICR5_C
AAA
DUF8810
AAA_7
UB2H
Motif
Other DBs
NCBI-ProteinID:
ALO43085
UniProt:
A0A0S2K4A6
LinkDB
All DBs
Position
I:complement(2972264..2974270)
Genome browser
AA seq
668 aa
AA seq
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MTDVFKLHSEFSPNGDQPTAIAQLCDGLEAGLAHQTLLGATGTGKTFTMANIISNLNRPT
IILAHNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMQMMLLLKVGDTVDQRDILRKLAELQ
YTRNDIDFSRGTYRVRGEVIDIFPAESDDIGVRVEMFDDEIERLSLFDPLTGAIEKHIVR
ATIYPKTHYVTPREKILDAIEKIKDELRDRRKRLLDDNRLVEEQRVAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRASGEPPPTLLDYLPDDALMIIDESHVTVSQVGAMYKGDRSRKEN
LVEYGFRLPSAMDNRPLKFDEFEAISPQTIYVSATPGDYELEKSNGDVAEQVIRPTGLLD
PELEVRPVGSQVDDLLSEIYKRVEKKERVLVTTLTKRMAEDLTDYLNDHDVKVRYLHSDI
DTVERMEIIRDLRKGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSARSLIQTIG
RAARHLNGKAILYGDVITKSMKKAIEETERRRSIQEAYNEKHGIVPTALNKKITDVMDVG
ESVDESSSSPVSAKVAEPKAGYLDPKQIAEQISALETQMMHHARELEFEKAAKLRDEIHQ
LQQQLIDA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtatttaaacttcactctgaattttcaccaaatggggatcagccaacggct
atcgcgcaattgtgcgatggcttagaagcgggccttgcacaccaaactttactgggtgca
acgggtacgggtaaaacttttaccatggcgaatataatcagtaatctgaatcgcccgacc
attattcttgcacacaataaaactttggcggcacagctctatggtgagatgaaagagttc
tttcctgaaaatgcagtcgagtactttgtctcatattatgactactatcagcctgaagcg
tatgtggtggcaagtgatacctttatagaaaaagatgcgtcgataaatgaacacattgag
caaatgcgtttatcggcaaccaaagcgttattagaaagacgagacaccattattgttgcg
tctgtgtcggccatttatggtcttggtgatcctgattcttacatgcaaatgatgttactg
ctgaaagtcggtgacacagttgatcagcgtgacatccttcgtaagttagctgagctgcaa
tacactcgtaacgacattgattttagtcggggtacttatcgcgtaagaggagaggtgatc
gatatcttccctgcagaatcggacgatattggtgtgcgtgttgaaatgttcgatgatgaa
atcgaacgtttgagcttatttgatccgctgacgggtgccattgaaaagcacatcgttcgt
gcaactatctatccgaaaacccactatgttactccccgtgagaaaatcctagatgccatt
gaaaaaataaaagatgagctaagagatagaagaaagcgccttctcgatgacaatcgctta
gttgaagagcaacgtgttgctcagcgtacacagtatgatattgaaatgatgaccgagctt
ggttattgctctggcatcgaaaactacagccgctacctttctggccgtgcgtcaggcgag
ccgcctccaactttactcgattatttgcctgatgatgcgttaatgatcattgatgagtct
catgtgaccgtctctcaagtgggcgccatgtataaaggggatagaagccgcaaagaaaac
ttagtggaatacgggttccgtttgccatcggctatggacaaccgaccgctaaaattcgat
gagtttgaagcaatttcaccacagacgatttatgtatcagcgacaccaggtgattacgaa
ttagagaaatcaaatggcgatgtagcagagcaggttattcgtccgacgggcttacttgat
cctgaattagaagtacgcccagttgggtcacaagtggacgacttactctctgaaatttat
aaacgtgtagagaagaaagagcgcgtcttggtgaccacattaaccaagcgtatggctgaa
gacttaactgattatcttaatgaccatgatgtgaaggtgcgttatttacactcggacatt
gataccgttgagcgtatggaaattatccgcgatttacgtaaaggcgtatttgatgtgcta
gtgggcattaacttacttcgggaaggtctggatatgccagaagtatctcttgtcgcaatt
cttgatgcagacaaagaaggcttcttacgctctgcacgctctttaatacagacaattggt
cgggcggcacgtcacttaaatggtaaagcaattttatatggtgatgtgatcaccaagtcg
atgaaaaaagccattgaagaaacagaacgccgtcgctcaatacaagaagcttataatgaa
aaacacggcatagtgccaacggcattgaataagaaaatcacggatgttatggatgttggt
gaaagtgtcgatgagtcatcaagctcaccggtatctgcaaaagtggcagagcctaaagcg
gggtatctagatccgaaacaaattgcagagcagatcagcgcacttgaaacacaaatgatg
catcatgctagagagctagagtttgaaaaagcggccaagttacgtgatgaaatccaccaa
ttacagcagcaattgatcgatgcttag
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integrated database retrieval system
