Pseudoalteromonas phenolica: PP2015_3061
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Entry
PP2015_3061 CDS
T04165
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03420
Nucleotide excision repair
pphe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP2015_3061
03430 Mismatch repair
PP2015_3061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_3061
Enzymes [BR:
pphe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PP2015_3061
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP2015_3061
MMR (mismatch excision repair)
Other MMR factors
PP2015_3061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
SAP18
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALO43541
UniProt:
A0A0S2K656
LinkDB
All DBs
Position
I:3484758..3486923
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSDLIDGLNDKQREAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEHASPYSIFAV
TFTNKAAKEMRTRVEETLKSPVGGMWIGTFHGLSHRILRAHHREANLPEAFQILDTDDQV
RMIRRLLKAMNIDEKKWPPKQIAWYISARKDEGQRPKDIQAYDVNEQLMLRVYTAYQEAC
DRAGLVDFAEILLRCFELLQQQPTLLRHYQQRFRHMLVDEFQDTNNIQYRWLKLLAGGGS
NIMIVGDDDQSIYGWRGAKIENIKRFLDDFDAETIRLEQNYRSTATILKASNALIENNAE
RMGKSLWTDGNQGEPISIYAAFNELDEARFVVGKIKTWLNGGNALQDCAILYRNNAQSRI
LEEAMLQEGLKYRIYGGMRFFERQEIKDALCYLRLICNRQDDAAFERVINTPARGIGDKT
LSHIRDCARNESMPLWYAAKAILEQKHLAGRASTAVTKFVELIEHLSDKIDELELSEQAK
QTIEVSGLMAMYQAEKGEKGRARVENLEELISACGQYEPPIDEDFSSPLQGFLAYTSLEA
GEGQADEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSHEESGRLEEERRLCYVG
MTRAMDKLYISHAESRRLYGQEKHHSPSRFLREIPEDCVEEIRIKTQVSRPTSTGRFSNT
ITLATFEESGYNLGQRVLHAKFGAGTVLNYEGNGAQSRIQVNFDDVGTKWLVTAYARLES
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatttaattgacggcttaaacgataaacaacgcgaagctgtagctgct
cctttgcagaatatgctggtgctggctggcgcaggctcaggtaaaacgcgagtacttgtt
catcgtattgcgtggttaatgcaggtagagcacgcctctccttatagtatttttgctgta
acctttaccaataaagctgccaaagaaatgcgtacccgtgttgaagaaacacttaagtcg
cctgtcggcggcatgtggatcggcactttccatggtttatctcaccgaattttacgcgct
catcaccgcgaagcaaacttacctgaagcatttcagatcttagacactgacgaccaagtt
cgtatgatccgccgtctgttgaaagccatgaatattgatgaaaagaaatggccaccaaag
caaatcgcctggtatatcagcgcccgtaaagatgaaggtcaacgtccaaaagatattcag
gcttatgatgtgaacgaacaactcatgttgcgcgtttatacggcttatcaagaagcctgt
gacagagcaggtttggtcgactttgctgaaatcttattgcgctgctttgagttgttacaa
caacagccaacattactacgtcactatcagcaacgtttccgccatatgctagtagatgaa
ttccaagataccaacaacattcaatatcgttggctaaaactgctggctggcggtggcagc
aatatcatgatcgtaggcgatgatgaccaaagtatttacggctggcgtggtgctaaaatt
gaaaacatcaaacgctttttagatgacttcgatgcagagacaatccgcctagagcaaaat
tatcgttcaacagcaaccattctaaaagcatctaacgcactgattgaaaacaacgccgaa
cgaatgggtaaaagtctttggaccgatggcaaccaaggcgaaccaatttcgatttatgcc
gcctttaatgaattagatgaagcccgttttgtagtaggtaaaatcaaaacttggctgaat
ggaggtaatgcgctacaagattgcgccattctttatcgtaacaacgcccagtcacgtatt
cttgaagaggccatgttacaagaaggcttgaaataccgtatttacggcggtatgcgcttc
ttcgagcgccaagagatcaaagatgctttatgttacttacgcctgatctgcaaccgtcag
gatgatgccgcatttgagcgagttattaataccccagcccgtggtattggtgacaaaacc
ttgagccatatccgtgactgtgcacgaaatgaatcaatgccattgtggtacgccgcaaaa
gcgattctagaacaaaagcatttagctggtagagcttcaactgcagtcactaagtttgtt
gaacttatcgagcatctcagcgataaaattgatgagctagaattgagcgaacaagccaaa
caaaccattgaagtatctggcctaatggcaatgtaccaagccgaaaaaggcgaaaaaggt
cgtgctcgagtagaaaacttagaagaattgatcagtgcctgtggtcaatacgagccgcct
attgatgaagactttagttcaccactacaaggctttttagcctacacatcactcgaagct
ggtgaaggccaagctgatgaacatgaagatgcggtgcaaatgatgaccttgcactcggca
aaaggtctagaattcccacttgtatttatggttggtgtagaagaaggcatgttcccttca
cagcaaagccatgaagagtcgggtcgcttagaagaagagcgccgcttatgttatgtcggt
atgacccgagcaatggataaactttatattagtcatgctgaaagtcgtcgcttgtatgga
caagaaaagcaccatagtccttcgcgcttcttacgtgaaatcccagaagattgtgtagaa
gaaattcgcattaaaacacaagtttcgcgcccgacgagtactggcagatttagtaacact
attactttagcgacctttgaagagagtggctacaaccttgggcaacgggtattacacgct
aaatttggcgctggcaccgtattaaattatgaaggtaatggcgcgcaatcacgtattcaa
gtcaactttgacgatgtgggtactaaatggcttgtcaccgcttatgcaagactcgaaagt
atataa
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