Pseudoalteromonas phenolica: PP2015_3122
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Entry
PP2015_3122 CDS
T04165
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03030
DNA replication
pphe03410
Base excision repair
pphe03420
Nucleotide excision repair
pphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP2015_3122
03410 Base excision repair
PP2015_3122
03420 Nucleotide excision repair
PP2015_3122
03440 Homologous recombination
PP2015_3122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphe03032
]
PP2015_3122
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_3122
Enzymes [BR:
pphe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP2015_3122
DNA replication proteins [BR:
pphe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PP2015_3122
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PP2015_3122
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP2015_3122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALO43601
UniProt:
A0A0S2K5K2
LinkDB
All DBs
Position
I:complement(3551773..3554520)
Genome browser
AA seq
915 aa
AA seq
DB search
MSQIPENPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLVRQFNPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSITGVEADDVIGT
FARIASEQQRHVLISTGDKDMAQLVNEHVTLINTMTDTVLDPQGVVDKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGIGSIKSLYDRLDDIAGLGFRGSKTMAKKLEEHK
AQLDLSYELATIKLDVEVEQNLETFAIADMNKDRLIELYGQCEFKRWLSELLDGKEAPKT
AAEQAQPEAKKIEAHYETILTEAQLTTWAEKLKSAELMAFDTETTSLDYMQADLVGMSFA
VKEGEAAYLPIAHDYMGAPEQLSKEFVFEVLGPVLADDSVKKVGQNLKYDKSVLARAGLE
LNGIAFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEEIAGKGKSQLTFNQIELEKA
APYAAEDADITLRLHNQLWPMLKEQSELLPVFNEIELPLLSVLSDIERTGVKIDSQMLAE
QSVEIAARLTELEKEAYEIAGEEFNLSSTKQLQAILFDKLGLPVLKKTPKGAPSTAEEVL
QELAHDYPLPKLIIEHRGLAKLKSTYTEKLPKLVNPETGRVHTSYHQAVTATGRLSSSDP
NLQNIPIRNEAGRRIRQAFIADEGHVILAADYSQIELRIMAHLSQDAGLLKAFAEGKDVH
SATASEVFGVPLEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDIPRNEAQHYMDKYFER
FPGVLEYMERTREEAAEKGYVETLFGRRLHLPDIKARNGARRKAAERAAINAPMQGTAAD
IIKKAMLKVAQWLATQTTNDIKLLMQVHDELVFEIAKDKVEAFSEHICSLMSEAASLDVP
FLVEADYGENWEQAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatccccgaaaatcctttgatcttggtcgatggttcttcttatttattccgt
gcgtatcatgctccaccgcatttaaccaattcaaaaggtgaggcgacgggtgccatctat
ggtgtgatcaatatgttgaagagcctcgttaggcaatttaacccaagccatatggttgtg
gtatttgacgccaagggtccgacatttagaaatgaaatgtacagcgaatataaagcgcac
cgcccgccaatgcctgatgatctgcgtacgcaaattgaaccgatccatgagatcatcaaa
gcgatgggtttacctttagtcagcatcacaggtgttgaggccgatgatgtgattggtact
tttgcgcgcattgcgtctgagcagcagcgtcatgtgttgatcagcacgggcgataaagat
atggctcaactcgtgaatgagcatgtcaccttaattaataccatgactgacaccgtactc
gatccacaaggggtggttgataaatttggtattggtcctgagcttatcattgattatctc
gcgctgatgggtgataaagtcgataacatcccaggcgtgcctggtgtgggtgaaaaaact
gcactggctatgctacaaggcattggttctattaagtcactttatgacagattagatgac
attgcaggtcttggtttccgtggttctaaaaccatggctaaaaagctagaagaacataaa
gcgcagctagatctgtcttatgaattagcgaccattaaactagacgttgaagttgagcaa
aacctagagactttcgcgattgctgacatgaataaagatcgtttgatcgaactttatggg
caatgtgaatttaagcgttggcttagtgaattactcgacggtaaagaagcgcctaaaact
gcagcagagcaagcacagcctgaagctaaaaaaatcgaagcacattacgaaaccatttta
actgaagcacagttaactacatgggccgaaaagcttaaaagtgctgagcttatggcattt
gatacagaaacgacgagcttagactacatgcaagctgatttagtcggtatgagctttgcc
gtgaaagaaggtgaagccgcttatttaccgattgcgcatgattacatgggcgcgccggag
caactttcgaaagagttcgtattcgaggtgctaggcccagttttggctgacgacagtgtg
aaaaaagtgggccagaaccttaaatacgataagagtgtgttagcccgagccggcttagaa
ctcaatggtatcgcttttgatactatgctcgagtcttatgtctttaatagtgtgggcaca
cgtcatgatatggattcactggcactaaaatatttaggtcataagaatatcagctttgaa
gaaattgccggtaaaggtaaatcgcaattgaccttcaatcaaattgagttagagaaagcc
gcaccttatgcggcagaagacgcggacattacattacgcttgcataaccaactttggcct
atgctgaaagagcaatcagagctgctacctgtatttaacgagatagagctgccgttatta
tctgtgttatcagatatcgaacgtaccggtgtgaaaatcgatagccaaatgttggctgag
caaagtgtcgaaatcgccgctcgcctgactgaacttgaaaaagaagcgtacgagatcgca
ggcgaagaatttaacttaagttcgactaagcaattacaagcgatcctatttgacaagctt
ggcttgccggtattgaagaaaacccctaaaggtgccccttcaacggctgaagaagtactg
caagaattagcacatgattatccgttgccgaaacttatcattgagcaccgtggtttagct
aagcttaaatctacttatactgagaagctgcctaagcttgtgaaccctgaaacgggtcgt
gtacatacctcttatcatcaggctgtgaccgcaacaggtcgattaagctcaagcgatcca
aacttacagaatattccaatccgaaatgaagcgggtcgtcgtattcgtcaggcatttatt
gccgatgaagggcacgtgatcttggcggcggactacagccagattgaattgcgtattatg
gcgcacttgtcacaagatgcaggtttactgaaagcatttgctgaaggcaaagacgtacac
agcgcaacggcttctgaagtattcggtgttccgcttgaagaggtcacatcggatatgcgc
cgtaaagcgaaagcggttaacttcggtttgatctacggcatgagtgcgtttggtttggcc
cgtcagctagacattccgcgtaatgaagcacaacattatatggataagtattttgagcgc
ttcccaggtgtacttgaatatatggaacgtacgcgcgaagaagcagctgaaaaaggttat
gttgaaacgctatttggtcgtcgcttgcacctgcctgatattaaggcaagaaatggcgcg
cgtcgcaaagcggctgaacgtgcagcgatcaacgcaccaatgcaaggtacagcggctgat
attatcaaaaaagccatgctgaaagtggcacaatggcttgctacacaaacgaccaatgac
atcaaattacttatgcaagtacacgatgaattagtatttgaaattgcgaaagataaagtt
gaagcgtttagcgaacatatttgttctttaatgagcgaagcggccagtttagatgtgcca
tttttagttgaagctgattacggcgaaaactgggaacaagcacactaa
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