Pseudoalteromonas phenolica: PP2015_3324
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Entry
PP2015_3324 CDS
T04165
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphe03016
]
PP2015_3324
Enzymes [BR:
pphe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PP2015_3324
Transfer RNA biogenesis [BR:
pphe03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PP2015_3324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ALO43799
UniProt:
A0A0S2K5M4
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All DBs
Position
I:complement(3780550..3781077)
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AA seq
175 aa
AA seq
DB search
MSEAKRLFFGIGLDQRMTEHLEAWLTRSVTAKKPHTKPSNWHLTLAFLPNVSAEQQAQLI
EFARALQVARFSLTFSETGYWAHNGIFYLKPDFIAPQLKALAEPLRSKGTELGIYDNPYE
FSPHITLYRSHKPCPETNQAIVPCSLQVNQFHLYHSYRTEADGLIYEPIETFDLI
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcaaagcgcttgttctttggaataggattagatcagaggatgactgagcac
cttgaggcttggcttacacgttctgtcaccgcaaaaaagccacataccaagcccagtaat
tggcatcttactttggcttttttaccgaatgtgtctgctgagcagcaagcgcaattaatt
gaatttgctcgcgcacttcaagtggctcgcttttctttaacgtttagcgaaactggctat
tgggcgcacaatggtattttttatttgaaacccgacttcattgcgccacaacttaaagct
ttagctgagccattaaggagcaaaggcactgaactgggtatttatgataacccttatgag
ttttcgcctcacatcaccttataccgaagtcataagccatgtcctgaaacaaatcaggct
atcgtgccatgttcacttcaggtcaaccagtttcatctttatcactcgtatcgcacagaa
gccgacgggctcatttacgagccgatagagacctttgatttaatctaa
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