Pseudoalteromonas phenolica: PP2015_3407
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Entry
PP2015_3407 CDS
T04165
Name
(GenBank) Regulatory protein, LysR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphe03000
]
PP2015_3407
Transcription factors [BR:
pphe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PP2015_3407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ALO43882
UniProt:
A0A0S2K5W5
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All DBs
Position
II:23341..24234
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AA seq
297 aa
AA seq
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MITNINYNHLYYFWQVSRHGSIAAASKVLHLTPQTVSAQITSLEHRLGKPLFLREGRGLR
LTEFGQVTKQYADDMFAIAEEWLETTQGDMSNVSKTLRVGISDSLPKSLVSKWLAPLIEN
ERISNLHCIDGQQAELLAQMATHKLDLVLADKPLDSSLPFKAFCHEIGKSQLGFFGKASL
QSSVQTQFPNLLSELPVILPAKTSPVTNAIKFWLEDLELEVSVAGHVDDSALMKALGEQG
FGIFPAPLSIKQEIEKALDVTYLGSIENVYQHYYAFTPDRLIKDSIYSEFVKNAQSC
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgattaccaacataaattacaaccacctttattacttttggcaagtaagccgccatggc
agcatcgcggcagccagtaaagtgttacatctgacaccacaaacggtcagtgcgcaaatt
accagtcttgaacatagactcggtaaaccattatttttacgtgaagggcgaggtttacga
ctaactgagtttggtcaagtgacgaaacaatatgctgacgatatgtttgccattgccgaa
gaatggcttgaaactacgcagggtgatatgagtaatgtctctaaaacgctcagagtaggt
atctccgattctttaccaaagtccttggtatctaaatggctagcacctctgattgaaaac
gaacgtatttcgaatttacattgtattgacggtcagcaagctgagctattggcgcaaatg
gccacgcacaagcttgatctagtattagctgataagccattagatagtagtctgccgttt
aaagctttttgtcatgagataggaaagagccaactgggcttttttggtaaagccagctta
caaagtagtgttcaaactcaattccctaacctcttaagcgagctaccagtgattttacca
gctaaaaccagcccggtgacaaacgcgattaaattttggttagaagacctagagctagaa
gtatctgtagcgggtcatgttgatgacagtgcattaatgaaagcacttggtgagcaaggt
tttggcatcttccctgcgccattgtcaattaagcaggaaatcgaaaaagcacttgatgtg
acttatttaggttcaattgaaaatgtctatcagcattattatgcgtttacacctgataga
ttaattaaagattcaatttactcggagtttgtgaaaaacgcacaaagctgctga
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