Pseudoalteromonas phenolica: PP2015_3803
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Entry
PP2015_3803 CDS
T04165
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_3803
Enzymes [BR:
pphe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PP2015_3803
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PP2015_3803
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALO44272
UniProt:
A0A0S2K788
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All DBs
Position
II:491754..493325
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AA seq
523 aa
AA seq
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MNNQYQTLRLVLGDQLNASHSWYQDKSEDVLYVMAELHQEATYTVHHIQKVQAFFAAMQG
FAAGLKQAGFHVLHLTLDDTAEFKNLPEMLTHLIKKFGIQQFEYQLADEARLRTQMSEFC
QSLEIKTMGFEAEHFYVSDQELGQYFKVNKKHRLEHFYRTLRARFDILMRNGEPEGGQWN
YDKDNREKLKKQDLSDVPQPLLFANDVTEINERIARHNIKTMGKGDNTLLWPINRKQSVE
LLNFFCEVCLPNFGRFQDAMTGQLKGLGEDLGWSLYHSRISFALNSKILSPKQVVDTAIH
YYRQSNGKINLAQIEGFVRQILGWREFVRGIYWANMPNYATLNHLDTTRVLPSWFWDANT
KMNCQHHAISQSLDYAYAHHIQRLMITGNFCLIAGIHPDEVDAWYLGVYIDAIEWVEMPN
TRGMSQFADGGIVGSKAYAASGNYVKKMSDYCSSCTYKVTETVGSNACPLNSLYWHFMHR
NQEKLGNNPRTAMVFKNWLKKTDEQRAAVLNQAETYLENINNI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcagtatcaaacactcagattagtattaggcgatcaactcaatgccagtcac
agctggtatcaagataaaagcgaagatgtattgtacgtaatggcggaattacaccaagaa
gccacttatacggtgcatcacattcaaaaagtacaggcgttttttgctgctatgcaaggg
tttgcagcaggcttaaagcaagcagggtttcacgttctgcatttaacattagacgacact
gcagagtttaaaaacttaccagaaatgctaactcatttaattaaaaagttcggtatacag
caatttgagtatcagcttgctgatgaagcaaggcttcgtactcaaatgagcgagttttgc
caaagcctagaaatcaaaaccatgggctttgaagccgagcacttttacgtgagtgaccaa
gagctaggacaatactttaaagtcaacaaaaagcaccgcttagaacacttttatcgtact
ttgcgtgcacgtttcgatattttaatgcgaaatggtgagcctgaaggtgggcaatggaat
tatgataaagacaatcgtgagaagcttaaaaaacaagatttaagtgacgtaccgcaacct
ttgttatttgccaatgatgtcactgaaatcaacgagcggatcgctcggcacaatataaaa
acaatggggaaaggtgataacactttactctggcctataaatcgcaagcagtctgttgag
cttctgaactttttttgtgaagtatgcttgccaaactttggccgttttcaagatgctatg
acgggacaattaaaaggtctgggtgaagacctaggctggagtttgtaccacagtcgaatt
tcatttgccctaaacagtaaaattttgtcgccgaagcaggtggttgataccgcgatacat
tactatcgacaatcaaatggtaaaatcaatttggcgcaaatagaaggctttgtcagacaa
atacttggctggagagagttcgtaagaggaatctactgggcaaatatgcctaactacgca
acattgaaccatttagacacaacacgtgtgctaccaagttggttttgggatgcgaatacc
aaaatgaattgccaacatcatgcaatcagtcaatcacttgattatgcctatgcgcatcat
attcagcggttaatgatcacaggtaatttttgtttgatcgcaggtattcaccctgatgag
gtagatgcttggtatttgggcgtgtatatcgatgccattgaatgggtagagatgccgaat
actcgaggcatgagccagtttgctgatggtggtatcgtcggctccaaagcttatgctgca
agcggaaactatgtgaagaaaatgagtgactattgttcgagttgtacttacaaagtgact
gaaacagtggggagcaatgcttgcccattaaattcactgtattggcactttatgcatcgg
aaccaagaaaagctaggcaacaacccacgtacagctatggtatttaaaaactggcttaaa
aaaaccgatgagcaaagggctgcggtacttaatcaagcagaaacctacttagaaaatatt
aataatatttaa
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