KEGG   Pseudoalteromonas phenolica: PP2015_4110
Entry
PP2015_4110       CDS       T04165                                 
Name
(GenBank) C4-dicarboxylate ABC transporter
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pphe  Pseudoalteromonas phenolica
Pathway
pphe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pphe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PP2015_4110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pphe02022]
    PP2015_4110
Two-component system [BR:pphe02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PP2015_4110
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 HTH_8 AAA_3 AAA AAA_16 HTH_50 FleQ AAA_7 MCM Herpes_BLRF2 HTH_28
Other DBs
NCBI-ProteinID: ALO44577
UniProt: A0A0S2K8C3
LinkDB
Position
II:874138..875490
AA seq 450 aa
MSHSSVIVIDDEKSIRDALKQLLELEGYEVFCYGDANAALSKLSRRFNGVVLSDINMPKL
NGLEFIEQIKQFDSELPVIFLTGFADVNIAVKAMHLGAYDLFEKPITDKLLDCIARASEK
RALVLENRELKQSVKQHSGPGVRILGQTQVMQDMLQLLDAVLDTPADVLIEGETGTGKEL
VARYLHEHSNRSKHNFVAINCGAIPEELIESELFGAKSGAYTGAHSSRIGKFEYAQGGTV
FLDEIEAMSPSLQVKLLRVLEERKVTPVGENTSIDLDVRVIAATKVDLQNLVDAQQFRAD
LYYRLNLLKVPIPALRERKADIPLLYKHFCSIAATRFHKTFEPITPEQALLLREKPWPGN
VRELRNHAERTVLLGKALALKDLEQVSQTDESLSLQEKVSYFEQSLIEEALSQSQGSIKE
AMALLQLPRKTLYDKMAKYGLTRTMFTESE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagtcattccagcgtcattgttattgatgatgaaaagagcattcgtgatgccttaaag
caactactagaattagaaggctatgaggtgttttgctatggcgatgccaatgccgcgttg
agcaaattaagccgccgttttaatggagtggtgttaagtgacatcaatatgcctaaactc
aacggccttgaatttatagaacaaattaagcaattcgacagcgagttaccggttattttc
ttaacgggttttgcggatgtgaacattgcggttaaagccatgcaccttggtgcctatgac
ttatttgaaaaaccaattaccgataagctgttagattgcatagccagagcctctgaaaag
cgcgctttggtgcttgaaaaccgagagcttaagcaaagtgtgaaacaacattcggggcct
ggggtgcgaattttaggtcaaactcaagtcatgcaagatatgctgcaactgctcgatgcg
gtgttagataccccagctgatgttttaattgagggagaaactggcacaggtaaggagctg
gtggcacgttaccttcatgagcatagtaaccgcagtaaacataattttgtggccattaac
tgtggtgccattcctgaagagttgattgaaagtgaattgtttggtgcaaaaagtggtgcc
tacacaggggcacatagttcgcgtattggtaagtttgaatatgcgcagggcggcaccgta
tttctagatgaaattgaagctatgtcgcctagcttacaagttaagttattacgggtttta
gaagagcgtaaagtcacacctgttggtgaaaacacctcgattgatttagatgtcagagtg
attgcagcaactaaagtggacctacaaaacttggttgatgcgcagcaatttagagctgac
ctttattaccgtttgaatttacttaaagtgcccattcctgcattgcgtgaaagaaaagca
gatattcctctgttgtataagcatttttgctccattgcagcgacccgttttcataagaca
tttgaacctattacacccgagcaagccttgctactcagagaaaagccttggccgggtaat
gtgcgagagcttagaaaccatgctgaaagaacagttttgttgggtaaggcattggcctta
aaagatttagagcaagtctctcaaactgatgagtcattgagtttacaagaaaaagtgagt
tattttgagcaatcattaattgaagaggctctctctcaatcacaaggcagtatcaaagaa
gccatggcgctgttgcaattacctcgtaaaaccttatacgacaaaatggcaaagtatggt
ctaacccgtactatgtttaccgaatcagaatga

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