Pseudoalteromonas phenolica: PP2015_4176
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Entry
PP2015_4176 CDS
T04165
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphe03032
]
PP2015_4176
03036 Chromosome and associated proteins [BR:
pphe03036
]
PP2015_4176
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_4176
DNA replication proteins [BR:
pphe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PP2015_4176
Chromosome and associated proteins [BR:
pphe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PP2015_4176
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PP2015_4176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
TFIIB
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ALO44643
UniProt:
A0A0S2K9A9
LinkDB
All DBs
Position
II:951749..952024
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAQLVEKMAADAEISKAAAARALESFTGAVTDSLKEGNSVALVGFGTFSVKERAARTG
RNPQTGAEIQIAAANIPSFKAGKGLKDQVNQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcaactagttgaaaagatggcagctgatgctgaaatttctaaagccgct
gcagcaagagcgcttgaatcattcactggtgctgtaacagactctcttaaagaaggtaat
tcagtagcacttgttggttttggtactttctcagtaaaagagcgtgcagctcgtactggc
cgtaaccctcaaactggtgctgagattcaaatcgcagcagcaaatattcctagcttcaaa
gcaggtaaaggtcttaaagatcaagtaaatcaataa
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