Pseudoalteromonas phenolica: PP2015_579
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Entry
PP2015_579 CDS
T04165
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_579
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PP2015_579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
DUF7125
AAA_22
SLFN-g3_helicase
Rad51
nSTAND_NTPase5
DUF6549
GvpD_P-loop
RecA_N
AAA_14
Viral_helicase1
AAA
NTPase_1
Zeta_toxin
AAA_16
ABC_tran
AAA_24
KdpD
PAXNEB
AAA_30
CSS-motif
AAA_29
zf-C2H2_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALO41100
UniProt:
A0A0S2JYN7
LinkDB
All DBs
Position
I:665840..667210
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AA seq
456 aa
AA seq
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MGKKKTAFVCSECGAEFARWQGQCSECKAWNTVTEFRVPSVKSPPRSSAMAGYAGMVDAK
VQTLDEVNLESLPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTVLLQTMCLLAES
MNTLYVTGEESLQQVAMRAHRLGLPTNKLKTLAETNVETICQLALQEKPSIMVIDSIQVM
HMSDVQSAPGSVSQVRESAAYLTRFAKQNQVAIIMVGHVTKDGTLAGPKVLEHCIDCSIL
LEGSSDSRFRTLRGNKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLNRGEEQTPGSLVMV
IWEGTRPLLVEVQALVDYSQLANPRRVTVGLEQNRLAMLLAVLHRHGGLQVSDQDVFVNV
VGGVKVSETSADLALITALVSSFKNFSLDRQLVVFGEVGLGGEIRPVPSGQERLREAAKH
GFKRAIVPNANKPKELIEGMEVIGVNSLSEALDALF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaaaaacagcatttgtatgcagtgagtgtggagccgaatttgctagatgg
caggggcaatgctcagaatgtaaggcttggaatacggtcactgaatttagagtgcccagt
gttaaatcaccacctcgcagttcagcaatggccggctatgcaggcatggtcgatgctaag
gtacaaacgcttgatgaggtaaaccttgaaagcttaccccgcttttcaactggttttaaa
gagtttgatcgagtacttggtggcggggtggttccaggcagtgctattttgattggtggt
tcgccaggcgcgggtaaaagtaccgttttactgcaaaccatgtgtttacttgccgagtcg
atgaatactttgtacgtcactggtgaagagtcactgcaacaagttgccatgcgtgcccac
cgtttggggctaccaactaacaaattgaaaacccttgcagaaaccaatgttgagacaatt
tgccaattggctttacaagaaaagccaagcatcatggtaattgactcaattcaggttatg
catatgagcgatgtgcaatcagcgccgggcagtgtctcacaagtacgcgaaagtgccgct
tatttgacgcgttttgcgaagcaaaaccaagtggccattattatggtaggtcatgtaact
aaagatggcaccttggcggggcctaaggtactagagcactgcattgactgctctatttta
ctagaaggtagtagcgatagtcgctttagaacattgcgcggtaacaaaaaccgttttgga
gcagtgaatgagttaggtgtgtttgccatgacagggcaaggcttaaaagaagtgtctaat
ccatcggctattttcttaaatcgtggtgaggaacaaacgcccggttcactggtgatggtc
atttgggaaggcacgcgcccgcttcttgttgaagtacaagccttggtcgattattcccaa
ttagcaaatcctcgccgtgtcactgttggtttagagcaaaaccgtctagctatgttgttg
gcggtattgcaccgccatggcggtttgcaagtttccgatcaggatgtgtttgtaaatgtg
gtaggtggcgttaaagtgtctgaaaccagtgccgaccttgctttgatcaccgcgcttgta
tcgagttttaagaacttctcactcgataggcaacttgtcgtttttggcgaagttggactc
ggtggtgaaattcgtcctgtaccaagtggtcaagaaagattaagagaagccgcgaaacat
gggtttaaacgtgctattgtaccaaatgccaataagccgaaggagcttattgaagggatg
gaagttataggcgtgaacagtctaagcgaagccctggacgcgttattttaa
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