Pseudoalteromonas phenolica: PP2015_883
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Entry
PP2015_883 CDS
T04165
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03030
DNA replication
pphe03430
Mismatch repair
pphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP2015_883
03430 Mismatch repair
PP2015_883
03440 Homologous recombination
PP2015_883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphe03032
]
PP2015_883
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_883
Enzymes [BR:
pphe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP2015_883
DNA replication proteins [BR:
pphe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP2015_883
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP2015_883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
ALO41401
UniProt:
A0A0S2JZD5
LinkDB
All DBs
Position
I:1020908..1021618
Genome browser
AA seq
236 aa
AA seq
DB search
MLKRQIVLDTETTGIDPKAGHRIIEIGCVELINRRLTGNNFHVYINPQRDIEDEAIDVHG
ITNEFLKDKPLYHQIAKEFFEYIKGAELIIHNAPFDVGFMDNEFALLQQGYPNTHDYCEV
LDTLVMARNLHPGQKNNLDALCRRYDIDNSKRTLHGALLDSEILADVYLAMTGGQVKMNL
ANNTESTSQTDNTSIRRLADNRPALKVVKASADEVIAHEERLKVVDKNGETLWQQN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagagacaaatagtcctagatactgaaacaacaggtatcgatccgaaagcgggt
cataggatcattgaaattgggtgtgttgaactcattaatcgccgtttaacaggaaataac
tttcatgtttatatcaatcctcagcgtgatattgaagatgaggcaatcgatgtccatggt
attactaatgaattcttaaaagataaaccgctttatcatcaaatagcaaaagagttcttt
gagtatattaaaggggctgagctcattattcataatgcgccgttcgatgttggttttatg
gacaatgaatttgcgctgttacagcaaggttatcctaacactcatgactattgcgaagtg
cttgatacgcttgttatggcgagaaatctgcacccaggtcagaagaataatctagatgct
ttatgccgacgttatgacatcgacaattcaaaacgtactctacacggcgcattactggat
tctgagattttagctgatgtttatttagcgatgacgggtggccaagtaaaaatgaacttg
gcgaataataccgagagcacatcgcaaacggataatacaagtattcgtcgtttagctgat
aaccgtccagcacttaaagttgttaaagcttctgccgatgaagtaatagcgcatgaagaa
aggttaaaagtcgtcgacaaaaatggcgagactctttggcaacaaaattaa
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