Pseudoalteromonas phenolica: PP2015_935
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Entry
PP2015_935 CDS
T04165
Name
(GenBank) Sigma-54 dependent response regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe02020
Two-component system
pphe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP2015_935
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PP2015_935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pphe02022
]
PP2015_935
02035 Bacterial motility proteins [BR:
pphe02035
]
PP2015_935
Two-component system [BR:
pphe02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PP2015_935
Bacterial motility proteins [BR:
pphe02035
]
Flagellar system
Flagellar assembly proteins
Others
PP2015_935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
Mg_chelatase
AAA_16
AAA
FleQ
HTH_24
AAA_14
MFD_D3
DUF2089
MerR
AAA_7
HTH_5
AAA_19
AAA_3
HTH_Crp_2
HTH_20
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALO41453
UniProt:
A0A0S2JZE3
LinkDB
All DBs
Position
I:1072766..1074175
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AA seq
469 aa
AA seq
DB search
MSHSILVVEDDAGLREALIDTLQLSGFDTVEASSAEEAVMLLKKQTFSIVVSDVQMGTMS
GLDLLKTIKLNYPDLPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYMPA
KEKETEGPVVADPQSLQLLELANKVAKSDASVMVLGPSGSGKEVLARFIHDKSERKDEAF
VAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQKGTILLDEITEMDLGLQAKL
LRVLQEREVERLGGRKTIDLDVRVLATSNRELKEAVAEGKFREDLYYRLNVFPLMWLPLN
ERPGDIVVLAEHLLARHTSKAGKPAVQLSDSAKQKLLSHSWPGNVRELDNVVQRALILQQ
GDTVHGEDIFIENYQPSLVITRTTNTEVSPQINVEQQARQVEPVISDIESYDAANYKATL
QDKEHQIILDTLHKCNGKRKDVAEVLGMSPRTLRYKLAKMRDMGILLPA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattcaattttagtcgttgaagatgatgcagggttaagagaagcgttaatagat
acacttcaactttcaggttttgatacggttgaggcgagttctgccgaagaagcggtcatg
cttttgaaaaaacaaaccttctcgattgtggtgagtgatgtgcaaatgggcacaatgagt
ggtttagatttactcaaaaccataaagctcaattatcctgacttgcctgtactgatgatg
acggcttacgcaaccattgatgatgcggttgaggcgatgcgtttaggtgccattgactat
atggcaaaaccgtttgcgcctgaagtgctgctaaatatggttagccgttacatgccagca
aaagaaaaagaaacagagggcccggtggttgctgatccacaaagtcttcaattacttgaa
cttgctaataaagtggcgaaatctgatgctagcgttatggtgctagggccaagtggttcg
ggtaaagaagtattggctcgattcattcacgataaatcagaacgcaaagatgaagccttt
gtagccatcaattgtgcggctattcctgaaaatatgctcgaagctactttgtttgggtat
gaaaaaggtgcgttcacaggagctattcaagcatgtccgggtaaattcgaacaagcacaa
aaaggcaccattttattggatgaaatcaccgaaatggatttaggtttacaagcaaagcta
cttcgcgtgttgcaagagcgagaagttgagcgacttggtggcagaaaaaccatcgactta
gacgtcagagttttggcgaccagtaaccgtgaacttaaagaagcggtggctgaaggtaag
ttcagagaagatttatattaccgcttgaatgtttttcctctgatgtggctgccactgaat
gagcgcccaggtgatatcgtagtgttagctgagcacttgttagcaagacataccagcaaa
gcaggtaagccagcagtgcaattaagtgatagtgcaaagcaaaagttattatcacattct
tggcctggtaatgtcagagagcttgataatgttgttcaacgtgctttgattttgcagcaa
ggcgatactgtacatggtgaagatatttttatcgaaaactatcaaccaagtttagtaatt
acaagaacaacgaatacggaagtgtcaccacagataaatgtggaacaacaggcgcgacag
gttgagcctgtaatcagtgacatagaaagttatgatgctgcaaattataaagcgacttta
caagataaagagcatcaaattattttagatacgctacataagtgcaatggtaagcgtaaa
gacgttgctgaggtactgggtatgagtccaagaactttacgttataaactcgctaaaatg
cgcgatatggggatccttttaccagcataa
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