Pantoea phytostimulans: ACF2G4_00175
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Entry
ACF2G4_00175 CDS
T11029
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pphi Pantoea phytostimulans
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphi03009
]
ACF2G4_00175 (dbpA)
Enzymes [BR:
pphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACF2G4_00175 (dbpA)
Ribosome biogenesis [BR:
pphi03009
]
Prokaryotic type
rRNA helicases
ACF2G4_00175 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Helicase_RecD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
XLQ79936
LinkDB
All DBs
Position
complement(34107..35489)
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AA seq
460 aa
AA seq
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MTAFSTLNTLPESQLDNLREMGYTSMTPVQAATLPAILQGRDVRAQAKTGSGKTAAFGIG
LLQHIDSAQFQTQALILCPTRELADQVSNVLRQLARFTRNIKILTLCGGQPMSAQRDSLI
HAPHIVVGTPGRILDHLKRETLKLENLRTLVLDEADRMLEMGFRDDMETIIKATPASRQT
LLFSATWPEGIAAISTRFQRDALSVVTEEVSELPSIDQQFIEASHNEKLSLLIALLSERQ
PSSCVVFCNTKRECDDVAAALNDRDISALPLHGDLEQRDRERVLIRFSNGSGRVLVATDV
AARGLDIKSLALVVNYQLAWDPEVHLHRIGRTARAGEEGAAVSFVAADEMARAHALEDFL
QKSLPWVSASTLKKGSSKPLPAAMMTLCIDGGRKAKIRPGDILGALTGEAGYRADQIGKI
DLTPTHAYVAIEATQAKSALVKLKQGKIKGKTCRAILLKD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctttttcaaccctcaatacgcttcccgaaagccaactcgataacttgcgcgag
atgggctacaccagcatgacgccggttcaggccgccacgctgcccgccattttgcagggt
cgcgacgtgcgtgcgcaggcgaaaaccggcagcggtaaaaccgcagcctttggcattggt
ttgctacaacatatcgacagcgcacagttccagacgcaggcgctgattctgtgcccaacg
cgtgaattagcggatcaggttagcaatgtgttgcgtcaactggcgcgcttcacgcgtaat
atcaaaattttgacgctgtgcggtggccagccgatgagcgctcagcgcgattcattgatc
cacgcaccgcatattgtggtcggcacgccgggccgtattcttgatcacctcaaacgtgaa
acgttaaagcttgagaatctgcgcacgctggtgttggatgaagcggatcgtatgctggaa
atgggtttccgtgatgatatggaaaccatcattaaagctacaccagcatcgcgtcaaacg
ctgctgttctctgcgacctggcctgaaggaatcgccgccattagcacccggtttcagcgc
gatgctctgagcgtggtaacagaagaagtcagtgaactgccctccattgatcaacagttt
attgaagccagccacaacgaaaagctatcactgctgattgcgctactcagcgaacgccag
ccctcatcctgtgtggtcttttgtaacaccaaacgcgaatgcgatgatgttgcggcagcc
cttaacgatcgtgacatcagcgccttgccgctgcacggcgatctggaacagcgcgaccgt
gaacgcgtactcatccgcttctccaacggcagcggacgcgtgttggttgctactgacgta
gcagcgcgtggcctggatattaagtcgctggcgctggtagtgaattaccaactggcgtgg
gatcccgaagtgcatttacaccgcattggccgtaccgcacgtgcgggtgaagaaggtgct
gctgtgagttttgtcgccgccgatgaaatggctcgcgcgcacgcgctggaagatttttta
cagaagtcgctgccttgggtctctgccagcacgctgaaaaaaggcagcagcaaaccgcta
cccgccgcaatgatgacgttgtgcattgatggcggccgcaaagccaaaattcgtccggga
gatattctgggggcattaacgggtgaagcgggctaccgcgctgaccaaattggtaagatc
gatctaaccccaacgcacgcgtatgttgctattgaagcgactcaggcgaaatcggcattg
gtcaaactcaagcaaggcaaaatcaaaggcaaaacctgccgcgcgatcctgttgaaagat
tga
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