Pantoea phytostimulans: ACF2G4_00790
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Entry
ACF2G4_00790 CDS
T11029
Symbol
recR
Name
(GenBank) recombination mediator RecR
KO
K06187
recombination protein RecR
Organism
pphi Pantoea phytostimulans
Pathway
pphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACF2G4_00790 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphi03400
]
ACF2G4_00790 (recR)
DNA repair and recombination proteins [BR:
pphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACF2G4_00790 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACF2G4_00790 (recR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
DZR_2
Ras_bdg_2
Motif
Other DBs
NCBI-ProteinID:
XLQ80054
LinkDB
All DBs
Position
160003..160608
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AA seq
201 aa
AA seq
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MQTSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADC
RTFTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGP
ADIGLDRLEQRLESETLNEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGE
LEMVDGTTLSHSLAGRHKIKF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtccactgcttgagtctttgatggaatcgctgcgctgtctgcctggcgtt
gggccgaaatcggcacagcgcatggccttccagctgttgcagcgcgatcgcagcggtggc
atgcggctggcgcaggcgcttacacgggccatgtcggaaatcggtcattgcgccgattgc
cgcacgttcaccgagcaggaaatttgcaccatttgcgccaatccccggcgtcaacaaaac
gggcaaatctgtgtggtggaaagcccggcagatatccacgccattgagcaaaccgggcaa
tttgccggtcgctactttgtgctgatgggccatctttcgccgcttgacggcattggcccg
gcggatattggcctggatcgccttgaacagcgcttagagagtgaaaccctcaatgaagtg
attctcgcgaccaacccaacggttgaaggcgaagccactgctaactatattgccgagctg
tgcgggcaatatggtgtcgatgcaagccgtatcgcccatggcgttccggtgggcggcgaa
cttgaaatggttgatggcaccaccctgtcgcactcgctggccggtcgccacaagattaaa
ttttaa
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