Pantoea phytostimulans: ACF2G4_05825
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Entry
ACF2G4_05825 CDS
T11029
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pphi Pantoea phytostimulans
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphi03016
]
ACF2G4_05825
Enzymes [BR:
pphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ACF2G4_05825
Transfer RNA biogenesis [BR:
pphi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ACF2G4_05825
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
XLQ80963
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All DBs
Position
1233069..1235003
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAIIHSDKDRESAEPETLVEPFLSRFVGRVQKKDDRLSIVPDHPLLKDAIQCRPARGVTH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFIIKADDHLAPWWVTLSRHNLEREAPDVGFG
EMMDEKLTREDLTALDFVTIDSASTKDMDDALYVEELNDGALRLTIAIADPTAYVPEGSQ
LDKVAAQRAFTNYLPGFNIPMLPRELSDDVCSLRPNMRRAALACRVTVAKDGTLGEDPQF
FAAWIESKAKLVYDDVSDWLENSGEWQPENEAIANQIRLLHRICLARGEWRQTHALVFKD
RPDYRFLLGEKGEVLEIIAEPRRIANRIVEEAMILANVCAAKVLRERLGFGIYNVHAGFD
ATNAEQAATVLAAHGITVDAEAITTLEGFRVLRRELDAQPTQFLDSRIRRFQTFAEISTE
PGPHFGLGLEAYATWTSPIRKFGDMINHRLLKAIIRGDDIARPDSALTVTMSERRRLNRM
AERDVGDWLYARYLSPFAGSDRKFSAEIIDVSRGGMRVRLLEFGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGEVAFRVTDVIDVTIAEVRMETRSVVARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctcaaagagaagctccactcgcaaacgcct
cgcgccgaaggtgtggtaaaaggcactgaaaaaggcttcggcttcctcgaagttgatgcg
caaaaaagctacttcatcccgcctccgcagatgaagaaagtgatgcacggtgaccgcatc
gttgccatcatccatagcgataaagaccgtgaaagtgctgaaccagaaacgctggttgaa
ccgtttctgagccgctttgttggccgcgtgcagaagaaagacgatcgtctttcaattgtc
ccggatcatccgctgctgaaagatgccatccagtgccgcccggcccgtggtgtgacacat
gattttcaagctggcgactgggcagtggctgagatgcgccgccacccgctaaaaggcgac
cgcggtttttatgctgaactgaccgaatttattatcaaagctgacgatcaccttgcgcca
tggtgggtgacgctgtcgcgccataaccttgagcgtgaagcgccagacgttggctttggc
gaaatgatggatgagaaactgacgcgtgaagatctcaccgcactggatttcgtcaccatc
gacagcgccagcaccaaagatatggatgatgcgctgtacgttgaggaactgaacgatggc
gcgctgcgtctgactatcgccatcgccgaccccaccgcttacgtgccagaaggcagccag
ctcgataaagtggcggcgcaacgtgcgtttactaactatctgccaggcttcaatattcca
atgttgccacgcgaactctctgacgatgtgtgttcgctgcgtccgaatatgcgccgtgca
gcgctggcttgccgcgtgaccgtggcaaaagacggcactttaggcgaagatccacagttc
tttgctgcgtggattgaatctaaagccaagctggtttacgacgacgtctctgactggctg
gaaaacagcggcgaatggcaacccgagaacgaagcgatcgcgaaccagattcgactgttg
catcgcatctgcctggcacgcggcgaatggcgtcaaacccatgcgctggtgtttaaagat
cgtccagattaccgcttccttctgggtgaaaaaggcgaagtgctggagatcattgccgag
ccacgccgcatcgctaaccgcattgtcgaagaagcgatgatcctggccaacgtctgcgcg
gccaaagtgctgcgtgaacgcctcggctttggtatctacaacgttcatgccggttttgat
gcgaccaatgccgagcaagcagcaacagtgctggctgcacacggcatcaccgtggatgcg
gaagcgatcactacgctggaaggcttccgcgtgctgcgtcgtgaactcgatgcgcagcca
acgcagttcctcgacagccgcattcgtcgcttccagactttcgctgaaatcagcactgaa
ccaggcccacattttggtttaggcctggaagcttatgcaacctggacttcgccgatccgt
aaatttggcgacatgatcaaccatcgtttgctgaaagcgattatccggggtgatgacatt
gctcgcccggatagcgcgctgaccgtgaccatgagtgagcgtcgtcgtctgaatcgcatg
gctgaacgcgatgtcggtgactggctgtatgcgcgctatctgtcgccgttcgctggcagc
gatcgtaaattcagtgccgaaattattgatgtgtcacgtggcggtatgcgcgtccgtttg
ctggagttcggcgcggtcgcctttatccctgccccgtttattcacgcggtgcgtgatgaa
ctggtctgcagccaggaaaacggcacggttcagatcaaaggtgaagtcgctttccgcgtc
accgacgttattgacgtgaccatcgctgaagtgcgcatggaaacacgtagcgttgtggct
cgcccagcggtataa
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