Pantoea phytostimulans: ACF2G4_06145
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Entry
ACF2G4_06145 CDS
T11029
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pphi Pantoea phytostimulans
Pathway
pphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACF2G4_06145 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphi03400
]
ACF2G4_06145 (xthA)
Enzymes [BR:
pphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACF2G4_06145 (xthA)
DNA repair and recombination proteins [BR:
pphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACF2G4_06145 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
XLQ81020
LinkDB
All DBs
Position
1298188..1298994
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AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLEALVEKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK
GHYGVALLTKVQPVSVRRGFPGDDEEAQRRLIMAEIPSPMGDITVINGYFPQGESRDHPT
KFPAKEKFYRDLQSYLTENHTADKPVLIMGDMNISSTDLDIGIGEESRKRWLRTGKCSFL
PEEREWMDRLLQWGLVDTWRDKNPETADCFSWFDYRSKGFDDNRGLRIDLILASQPLSSR
CTDTGIDYQLRSMEKPSDHAPIWSTFQF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtttcatttaacatcaacggattgcgcgcgcgcccacatcaactggaagcg
ttggtggaaaaacatcagcccgatgtcatcggtctacaggaaacgaaagtccatgatgat
atgtttccgctcgaggatgtggcaaaactgggctataacgtcttttatcacggccagaaa
ggccattatggcgtggcattgttaacgaaggttcagcctgtctctgtacgccgtggcttt
cctggcgatgacgaagaggcacagcgccgtctgatcatggctgagattcctagcccaatg
ggcgatattaccgttataaatggctacttcccgcaaggcgaaagccgcgaccacccgact
aaatttcctgctaaagagaaattttaccgtgacctgcaaagttatctgacagaaaaccac
accgcagataaaccggtattaatcatgggtgacatgaacatcagcagcacagatttagac
attggtattggtgaagagagccgtaaacgctggctgcgcaccggaaaatgttcattcctg
cctgaagagcgtgaatggatggaccgattgctgcagtggggtttagtggatacctggcgc
gataaaaatcctgaaacggcagattgtttctcatggtttgattatcgttccaaaggattt
gatgacaaccgcggtttgcgcatcgacttaattctggctagtcagccattatcatcacgt
tgtactgatacgggtatcgattatcaattgcgcagtatggaaaaaccctccgatcacgcg
ccgatttggtctacttttcagttttaa
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