Pantoea phytostimulans: ACF2G4_10560
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Entry
ACF2G4_10560 CDS
T11029
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pphi Pantoea phytostimulans
Pathway
pphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACF2G4_10560 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphi03400
]
ACF2G4_10560 (recD)
Enzymes [BR:
pphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACF2G4_10560 (recD)
DNA repair and recombination proteins [BR:
pphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACF2G4_10560 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
DEAD
nSTAND3
AAA_16
AAA_28
AAA_33
UvrD_C
T2SSE
TrwB_AAD_bind
CbiA
Zeta_toxin
DO-GTPase1
AAA
AAA_24
SRP54
ABC_tran
MukB
ATPase
Motif
Other DBs
NCBI-ProteinID:
XLQ78453
LinkDB
All DBs
Position
complement(2270810..2272651)
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AA seq
613 aa
AA seq
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MSEMMSLLMQAMEKRLLRPLDIQFARLLADESQPALLLAAACVSAEAGEGHVCLPLENLS
EARLFAGRQPALAQALWQAAGAPENWTERLAGWSALSDGSLVTPLVLNNQRLYLHRLWQS
EGEIATFFSLQDHSAKFDAHKASEVLNHLFGNEPDNWQKIAAAVALTRKTAVISGGPGTG
KTTTVAKLLAAMIRLNDGALRIQLAAPTGKAAARLTESLGKALQGLSVSEEERARFPAEA
TTLHRLLGAQPDTQRLRYHASNRLHLDVLVVDEASMVDLSMMAKLISALPAHARVIFLGD
RDQLASVEAGAVLGDICRCSESGYSLARAEQLALLTGCSLEGLDHHQAPVVRDSICLLKK
SYRFDATSGIGQLASAINLGDTRQVEKVFAAAFNDIHYQSLDSGEAYQLMLDDVAQGYRP
FLKLIKQNAPPAEIITAFGRYQLLCALREGPFGVQGLNQRVEQRLMQLQRIRRPGMGSRW
YLGRPVMITRNDSALGLFNGDIGITLRDAEGQLKVFFPLPDGSIKAVQPSRLPSHETAWV
MTVHKSQGSEFDHTAFVMPAQFLPVLTRELVYTAITRARNKLTLYSDLGVFQRAVALQTQ
RRSGLVERLAELG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatgatgtcacttttaatgcaggcgatggaaaagcgtctgttgcgtccttta
gatatccagtttgcccggctgctggccgatgaatcgcaacccgctttattactggcggca
gcttgcgtgagtgcagaggcaggagaagggcatgtctgcttgccgctggaaaacctgagt
gaggcgcgactgtttgccggacgccagcccgcgttggcgcaggcattgtggcaagcggcg
ggcgcacctgaaaactggacagaacgtttagccggttggtcagcgttgagcgacggtagc
ctcgtcacacccttggtgctgaataatcagcgactttatctgcatcgtttgtggcagagc
gaaggagagatcgcgaccttcttctcacttcaggatcacagcgctaagtttgatgcgcat
aaagccagcgaagtgcttaatcacttattcggtaacgaaccggataactggcaaaaaatt
gctgcggccgtcgcgcttacgcgaaaaaccgcggtgatttcaggtgggcccggcaccggt
aaaaccaccacggtagcaaaattattggcggcgatgattcgcctgaatgatggcgcgtta
cgcatccagctcgcggcacctaccgggaaagctgcggcgcgcttgacggagtcgctgggt
aaagcgttgcagggtttgtccgttagcgaagaggagcgggcacgtttccccgccgaagcc
accacgttacatcgcctgttaggcgcgcagcccgacacgcagcgtttgcgttatcacgcc
agtaatcgcctgcatctcgacgtgctggtggtggatgaagcgtcgatggttgacctttcg
atgatggcgaaattgatttcagcgctgcctgcgcatgctcgcgttattttcctaggcgat
cgcgatcagttggcttcagtcgaagcgggcgctgtgctgggcgatatttgtcgctgtagc
gaaagcggttacagcttagcgcgtgcggaacagttggcgttgctaaccggctgctcgctg
gaagggttagatcatcatcaagcgcctgtagtacgcgacagcatttgcctgctgaaaaag
agctatcgctttgatgcgacgtcaggcattggtcagctggcaagtgccataaatctgggc
gacacgcgccaggttgaaaaggtgtttgctgctgcatttaacgatattcactatcaatcg
ctcgacagcggcgaagcctatcagctgatgttggacgacgtggcgcaaggttatcgcccc
ttcctgaaactgattaagcaaaacgcgccgcctgcggagatcatcactgcatttggtcgt
tatcaactgctgtgtgcattacgcgaagggccttttggcgtgcagggtttgaatcagcgt
gttgagcagcgattaatgcagctgcaacgcattcgtcgtcccggcatgggcagccgctgg
tatttgggccgtccggtgatgattacccgtaatgacagcgcgcttgggctgtttaatggc
gatattgggattacgctgcgagatgcagagggccagctaaaagtctttttcccgctgccg
gatggctcgatcaaagctgttcagccgagtcgtttgccttcgcatgaaacagcttgggtg
atgacagtgcataaatcccaaggatcggaatttgatcacacggcatttgtcatgccagcc
caattcttgccggtattaacccgcgagctggtttacaccgcgatcacgcgcgcgcgtaat
aagctaacgctttacagcgatcttggcgtttttcagcgggcggttgcgctgcaaactcag
cgacgcagtggattggttgaacgtctggctgaattaggttag
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