Pantoea phytostimulans: ACF2G4_10575
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Entry
ACF2G4_10575 CDS
T11029
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pphi Pantoea phytostimulans
Pathway
pphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACF2G4_10575 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphi03400
]
ACF2G4_10575 (recC)
Enzymes [BR:
pphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACF2G4_10575 (recC)
DNA repair and recombination proteins [BR:
pphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACF2G4_10575 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF6415
Motif
Other DBs
NCBI-ProteinID:
XLQ78456
LinkDB
All DBs
Position
complement(2279179..2282556)
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AA seq
1125 aa
AA seq
DB search
MFHVYHSNQLDVLKILAAAVIKHDPLDDPFASEMVLVQSPGMAQWLQMELAQTFGIAANI
EFPLPASFIWEMFVCVLPDIPVESAFSKASMSWKLMHRLPVLLQQDEFLSLRHYLTDDAD
KRKLFQLSSRVADLFDQYLVYRADWLNRWERGEMIEGLGEAQQWQAALWRDLVVYTDALG
QPKWHRANLYARFIQTLETAQSTPENLPKRVFICGISALPPVYLQALQALSRHVDIHLLF
TNPCRDYWGDIQDYAFLAKLQSRQRRRYDADEARGLFRDAAQAPALFNASGEQQLTNPLL
ASWGKLGRDNLFLLSQMESNDDIDAFVDVEQDNVLHCIQHDLLNLQDNAIIGLNAEELAY
SGNKRCLEADDRSISIQVCHSAQREVEVLQDHLLSLMEADPHLKARDIIVMVADIDSYAP
FIQAVFANAPAERYLPFAISDRRASQAHPSIVAFLHLLALPDSRFVSEDILALLDVPALA
NHFSIDESGLRLLRRWVSESGVRWGLDDASVEALSLPITGQHTWRFGLQRMLLGYAMESH
NGDWEGILPYDESSGLVGELAGHLAELLARLNHWREILAQSRPLDEWLPLCREMINAFFS
ADAEAEAALLLVEEQWKQLIEYGMSARFDEAIPVTLLRDDLRGRLDQQRISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLAPLGFDLMQQQSRKGDRSRRDDDRYLFLEAM
ISAQHQLYISYIGRAIQDNTERYPSVLVTELLEYIGQSFYLDGDEECELDESAERVRAHL
EHLHTRMPFAAENFQPDSRSQSFAREWLPAALGEGQPQPDFVKPLDVPTLESLTLDAFLR
FWRHPVRAWFHQRLGVNFWLEDSELPDTEPFALDNLERYQINAELLNALVEGDDTERLYA
HHRAAGNLPYGAFGELFWQAQREEMQEVAAEVSSQRSDGENWEITLQPGNVPLTGWLTQV
QSDGLLRWRPGVLNMNDGLLLWLEHLVYCALGGTGTSRMYGRNHSRWRFPAIAADAALEA
LAHYVEGFRHGMSQPLMLLNKSGGAWLEASYDKKSQQLMTDEATQLKARNRLLQAWVGGY
QVEGEGGDPYLQRLCRVLDETQLQQITEAATQWYLPVLQAHQDDD
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacgtttatcactctaatcagcttgatgttcttaagattttggcggctgcggtg
attaaacatgatcctcttgatgatccttttgcttcagagatggtgctggtgcaaagcccg
ggtatggcgcagtggctgcaaatggaactggcgcaaacctttggtattgcggctaacatc
gaattcccactgccagccagcttcatctgggaaatgtttgtttgcgtgctgccggacatt
ccggttgaaagcgctttcagcaaagccagcatgagctggaagcttatgcaccgtttgccg
gtgttattgcagcaggatgagtttctctcgctgcggcactacctcaccgatgacgccgat
aagcgtaaattattccagctcagttcacgcgtagcggacctgtttgaccagtatctggtg
tatcgcgccgactggcttaaccgctgggaacgtggcgaaatgattgagggattaggcgag
gcgcagcagtggcaggcagcattgtggcgcgatttggtcgtctatacggacgcattgggc
cagccgaaatggcatcgtgctaatctctatgcacgttttattcagacgctggaaacggcc
caaagtacgccggaaaatttgccaaagcgcgtatttatttgcggcatctcggcgttgccg
ccggtttatcttcaagcgttacaggcgctaagccgccacgtcgatattcatttgctgttc
accaatccatgtcgcgattattggggcgacattcaggattatgcctttctggcaaagctg
caaagccgtcagcgtcgtcgatatgatgccgatgaggcgcgtggtttattccgcgatgcg
gcacaagcaccggcgctgttcaacgcctcgggcgaacagcagcttaccaatccgcttttg
gcatcgtggggcaagcttggccgcgataatctttttctgcttagccagatggaatcaaac
gacgacattgatgcctttgtcgatgttgaacaagacaatgtactgcactgcatacagcac
gatcttcttaacctgcaagacaatgccattattggtttgaatgctgaggaactggcctac
agcggtaataaacgctgccttgaggctgatgaccgttctatttcgatacaggtgtgtcac
agcgctcagcgagaagtggaagtgttacaggatcatttgttgtcgctgatggaggctgat
ccgcatctcaaagcgcgtgacatcattgtgatggtggcggacatcgacagctatgcgccc
ttcatccaggcggtgtttgcgaatgcaccggcggaacgttatctgccgtttgctatttct
gaccgccgcgccagtcaggcgcacccgtcgattgtcgctttccttcatttactggcactt
cccgacagccgctttgtttcagaagatattctggcgctgctggatgtccccgcgctggct
aaccatttttccattgatgaaagcggattacggctgttgcgccgttgggttagcgagtcg
ggcgtacgctgggggctggatgatgccagtgttgaagcgctttcgctgcccatcaccggt
caacatacctggcgctttggtttgcaacgcatgttattgggctatgccatggagagtcat
aatggcgactgggaaggcatactgccctatgacgaatccagcgggctggtgggtgaactg
gcagggcatctggccgaattgctggcgcgactgaatcactggcgcgaaatactggcgcaa
tcccgtccgttagatgaatggttgccgctgtgccgtgaaatgattaatgcctttttcagt
gcggatgcagaagccgaagcggcattgctgttggttgaagagcagtggaagcaattgatc
gagtatgggatgagtgcacgttttgatgaggcgattcccgtgacgctgctgcgcgatgat
ctgcgtggacgccttgatcaacaacggattagccagcgctttttggcgggtccaattaat
ttttgtacgctgatgccaatgcgatcaatccccttcaaagtggtttgtttgttgggaatg
aatgatggcgtttatccacgaacattggcaccgctgggttttgacctgatgcagcagcag
tcgcgtaaaggcgaccgcagccgacgtgacgacgaccgttacctgtttcttgaggcgatg
atttcggctcagcaccagctttacatcagctacattggtcgggcaatccaggataatacg
gaacgctatccctccgtgctggtcacagaactgttggaatatatcgggcaaagtttttat
ctcgacggcgatgaagagtgtgagttagatgagagcgccgaacgcgtgcgtgcacatctg
gaacatcttcatacccggatgcctttcgcggcagaaaactttcagcccgattctcgcagc
cagagctttgcccgtgagtggctgcccgccgctttgggtgagggtcagccccagccagac
tttgttaaacctttggatgtaccaacgctggagtcactgacgctggatgcctttttacgt
ttctggcgtcatccggttcgggcatggtttcatcagcgactgggcgtaaatttctggttg
gaagatagcgagttgccggataccgagccgtttgcgctcgacaacctggagcgctatcaa
atcaacgctgaattactgaatgcgctggttgaaggtgacgataccgagcgactttatgcg
catcatcgcgctgcgggtaatctgccttacggcgcgtttggcgaactgttctggcaagcg
cagcgtgaggagatgcaggaagtggcggcagaagtttcctcccagcgtagcgacggagaa
aactgggagataacgctgcaacctggaaatgttcccttaaccggttggctgacgcaggtg
caaagcgatggtctgttgcgctggcgccctggcgtgctcaatatgaacgatggtttgtta
ttgtggttggagcacttggtctactgcgcattgggcggaacaggcactagccggatgtat
ggacgtaatcacagtcgctggcgtttccccgccattgccgcagacgccgcgttagaagcg
ttggcgcattacgttgaaggtttccgccacggcatgagtcagccgttgatgttgcttaac
aaaagcggaggcgcctggttagaggcaagctacgacaaaaaaagccagcagttgatgacg
gacgaagccacgcaacttaaagcccgtaaccggttactgcaagcgtgggtgggcggttat
caagtcgagggagaaggtggtgatccttatttgcaacgcctgtgtcgggtattagatgag
acacagttacaacaaataactgaggccgcaacacagtggtatctgcccgtgttgcaggcg
catcaggatgatgattag
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