Pantoea phytostimulans: ACF2G4_15115
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Entry
ACF2G4_15115 CDS
T11029
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pphi Pantoea phytostimulans
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ACF2G4_15115 (hmsP)
Enzymes [BR:
pphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ACF2G4_15115 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XLQ79299
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All DBs
Position
3230161..3232167
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMATVSLVAVITVSIFIVIQLFHFVQQRRIDYAQQMETIAHSVRQPLSEA
VLRADIPQAEHILHSLKPAGILSRADVVLPNAFQALHADFEPEKPVPRLVARLFELPVQI
TLPLYSVENTGSPKPLAYLVLQANSSRVYQFILSTLSTMIITYLLLALILSVAISWCINR
LIIHPLRNISRELQELPPQSILAHKLTLPQGHRDDEIGMLIRSYNRNQQVLESVHDEMSR
LTTHFAVTDLPNRTLFLALVDQHMRHPCRPFGLMVIRVETLQEANGVLSDEQRDTLMLTL
VEKIRSTLDDHTLLAQTGPSDFALLMKRANNPFRAIRLARNLIIRLNQPVNLQQLQLRPN
ASIGLALRDDEPLGANELLDRATSAMMSARHQGKNQILFFDAALTERAQKRLTQEHDILQ
GLHDEQFALYLQPQINMQTGELAGAEALLRMRQPDGSYGLSEEFIASAEEIGVISAIGRW
VFEEACRILAGWQKHGVMIPLSVNISAVQLRDASMVTHLQSLLERHRIAPGTFVVEITET
AQIGDAEQAISLLRMLQQTGVAVALDDFGMGYSNLNYLHQFKALPVNKLKMDRSFVSALP
DDDTMVRIVAAIADIINLDVIAEGVETNEQRDWLLARGIHIGQGYLYSEAVNLTRFNQQW
IVKPSRTE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtaagtcggtcacttacgataaagcagatggcgacagtttcgctggttgccgtt
atcacggtcagcatttttatcgtcattcaactgtttcattttgtgcagcagcgcaggatt
gactacgcccagcaaatggaaacgattgcgcatagcgtgcgtcagccgctgtcggaagcg
gtactgcgagccgatataccgcaagctgaacacattttacattcgctgaaacctgccggg
attttatcccgcgcggatgtggtattacccaacgcttttcaggcgctgcatgcggatttc
gaacccgaaaaaccggtgccgcgcttagtggcgcgcctgtttgaactgccggtgcaaatt
acactgccgctctattccgttgaaaataccggttcgcctaaaccgctggcgtatttggtg
ttgcaagcgaactcctcgcgcgtgtatcaatttattctcagcacgctctcgaccatgatc
atcacctatttgctgctggcgctgattctttcggtagcgatcagctggtgtatcaaccgt
ttaatcatccatcctctgcggaatatctcccgcgagctacaggaactgccgccgcaatct
attctggcgcacaagctgacgctgccgcagggacatcgcgatgatgaaataggcatgctg
atccgcagttacaatcgcaatcagcaggtgctggagtcagtgcatgatgaaatgagtcgc
ctgacgacccactttgccgtgactgatttaccgaatcgcaccctgtttctcgccctggtt
gatcaacacatgcgccatccttgtcgaccgtttggtttgatggtgatccgcgtagaaacg
ctacaggaagccaacggcgtgttgagtgacgaacagcgcgacacgctgatgctgacgctg
gtggagaaaatacgcagcacactcgacgatcacaccttactggcgcaaaccggccccagt
gattttgcgctgctcatgaagcgcgccaataatccgttccgggcgatacgactggcgcgc
aacctgatcattcgacttaatcagccggtgaatttgcagcagctgcaattacgccccaat
gccagtatcggattggcattacgcgatgatgagccgttgggcgccaatgaactgctggac
cgcgcgacctcggcaatgatgtcggcacgccatcaaggcaaaaaccaaatcctgttcttt
gatgctgccttaacggagcgggcgcaaaagcgtttaacccaagagcacgatattttgcag
ggcctgcatgacgagcagtttgcgctctacctccagccgcaaatcaacatgcaaaccggt
gaattggcaggtgcggaagcgctactgcgcatgcgccaaccggatggcagctacggattg
tcggaagaatttattgccagcgccgaagagattggcgtgatctccgccattggccgttgg
gtattcgaagaagcctgccgcattctggcgggttggcaaaagcatggcgtgatgattcca
ctcagcgtgaacatttcagccgtgcaactgcgtgatgccagcatggtgacgcatctccag
tcgctgttagagcgccatcgtattgcgcccggcacttttgtggtggagattaccgaaacg
gcacagattggcgatgcagaacaggcgatttcgctattgcgaatgcttcagcaaaccggc
gtggccgtagcgctggatgattttggcatgggctattccaatctgaattacctgcatcag
ttcaaagccctgcctgtgaataaactgaagatggaccgcagttttgtctcagctttgccc
gatgatgacaccatggtgcgtattgtggcggcaatcgccgacatcattaatctggatgtc
attgctgagggtgttgaaacgaatgagcagcgcgactggctactggcgcgcggtattcat
attggtcaaggctacctctactctgaagctgtgaatctgacacgtttcaatcaacaatgg
attgtgaaaccgtcacgaacagaataa
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