Pantoea phytostimulans: ACF2G4_15500
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Entry
ACF2G4_15500 CDS
T11029
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pphi Pantoea phytostimulans
Pathway
pphi00071
Fatty acid degradation
pphi00280
Valine, leucine and isoleucine degradation
pphi00310
Lysine degradation
pphi00362
Benzoate degradation
pphi00380
Tryptophan metabolism
pphi00410
beta-Alanine metabolism
pphi00640
Propanoate metabolism
pphi00650
Butanoate metabolism
pphi00907
Pinene, camphor and geraniol degradation
pphi00930
Caprolactam degradation
pphi01100
Metabolic pathways
pphi01110
Biosynthesis of secondary metabolites
pphi01120
Microbial metabolism in diverse environments
pphi01200
Carbon metabolism
pphi01212
Fatty acid metabolism
Module
pphi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ACF2G4_15500 (fadB)
00650 Butanoate metabolism
ACF2G4_15500 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ACF2G4_15500 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ACF2G4_15500 (fadB)
00310 Lysine degradation
ACF2G4_15500 (fadB)
00380 Tryptophan metabolism
ACF2G4_15500 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ACF2G4_15500 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ACF2G4_15500 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ACF2G4_15500 (fadB)
00930 Caprolactam degradation
ACF2G4_15500 (fadB)
Enzymes [BR:
pphi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ACF2G4_15500 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ACF2G4_15500 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ACF2G4_15500 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
ACF2G4_15500 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
D5_N
Motif
Other DBs
NCBI-ProteinID:
XLQ79367
LinkDB
All DBs
Position
complement(3308555..3310738)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGANLSLHWLDDGIAELVFDAPGSVNKLDTKTVASLGEAIAVLEQQPTLRGLVLSSA
KPAFIVGADITEFLSLFDAPTEKLSQWLTFANSIFNRLEDLPVPTIAAIDGYALGGGCEC
ILATDLRVATPAARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGLSALK
LGLVDAVVESDKLRQAAITMVKEAAVNNSWRQRRAPKLAPLKLSPIEAAMSFTIAKSMVM
QTAGKHYPAPMTAVKTIEAAAALDRNDALKLETAAFVPLAQSDEARALVGIFLNDQYVKA
LAKKRSSESGAPSQAAVLGAGIMGGGISYQSAWKGVPVKMKDINPQALTLGMNEASKLLN
KLLERGKIDGGKLASVIATIQPTLDYSGFEQADIVVEAVVENPLVKAKVLAETELHLRQD
AILASNTSTIPISQLAQALQRPENFCGMHFFNPVPRMPLVEVVRGEKTSEATIGKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRHIDKVMEKQFGWPMGPAWLL
DVVGIDTAHHAQSVMADGFPQRMKKNYRDAIDALFDANRYGQKNGKGFWHWEEDKKGKLK
KVADAEVDTLLQQVCQPKREFTDEEILNRMMLPMLNEVVRCLEEQIVASPAEADMALVYG
LGFPPFRGGALRYLDTLGNSNVVDQAKRYTSLGALYELPALLLQKAHQHESWYPAAKPID
EAALKSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgcaaatctttctcttcactggctggacgacggcatcgccgagctg
gtttttgatgcacccggttcggtaaataaactcgacacaaaaacggtggcaagtttgggc
gaagccatcgccgtactggaacagcaaccaactttacgtggtctggtgctgagctcggct
aaaccagcgtttattgtgggcgcagatatcacggaattcctgtcactatttgatgcgccg
accgaaaagctcagccagtggctaacttttgcaaacagtatatttaatcgactcgaggat
ttgccggttccaaccattgccgctattgacggttacgccttaggtggcggctgtgaatgt
attctggccaccgatctccgtgtcgccacgcccgccgcacgtattggcttacccgaaacc
aaactgggcatcatgccaggttttggcggtagcgtacgtttaccccgcttgctcggtgcc
gacagcgccttagaaattattgcggcaggtaaagatgttgatggtttgagcgcactgaaa
ctcggtttagtggacgcggtggttgaaagcgacaagctgcgccaggctgcaatcaccatg
gtcaaagaggcagcggtgaataatagctggcgtcaacgccgcgcgccaaagctggcacct
ttgaaactcagcccgattgaagcagcgatgagtttcactattgccaaaagcatggtgatg
caaactgccggaaaacattatcctgcaccgatgactgcagttaaaaccattgaagccgct
gctgcgctggatcgtaacgatgcgctaaagctggaaacggctgcgtttgtaccgctggcg
caatcggatgaagctcgtgctttggtcggtatctttcttaacgatcaatatgtcaaagcg
ttggcaaaaaaacgcagtagtgaaagcggtgcgccatcacaggctgcggttctgggcgct
ggcattatgggtggcggcatcagctaccagtcagcgtggaaaggcgtgccggttaaaatg
aaagacatcaatccgcaggcgctaacacttggtatgaatgaagccagcaaattgcttaat
aagctgctggagcgcggaaaaattgatggcggcaagctggcgagcgtcattgctaccatc
caaccgacattggattactctggctttgagcaggccgatatcgtggtggaagccgtggta
gaaaatccgctggtcaaagctaaggtactggctgaaaccgaacttcatctgcgtcaggac
gccattctagcctcaaacacctccaccattcctatcagccaactggcacaagcgctgcaa
cgtcccgagaatttctgcgggatgcacttctttaatcccgtgccgcgtatgccactggtt
gaagtcgtgcgtggtgagaaaaccagcgaagcgacgatcggtaaagtggtggcctgggcc
agcaaaatgggtaaaacgccgattgtggtaaatgattgccccggttttttcgtcaaccgc
gtattgttcccctacttcgccgcttttagcttgctgctacgcgatggagcggacttccgt
cacattgataaagtcatggaaaaacagttcggttggccgatgggcccagcgtggctgctg
gatgtggtcggcattgatactgcacatcatgcgcaaagcgtcatggccgatggttttcca
cagcgcatgaagaaaaattatcgcgatgccatcgatgccctgtttgatgccaatcgttac
ggccaaaagaacggcaaaggtttctggcattgggaagaagataagaaaggaaagctgaaa
aaagtggcagatgcggaagtggatacgctgctgcaacaggtttgccagcctaaacgcgag
ttcacggatgaagagattcttaaccgcatgatgctgccgatgctgaacgaagtggtgcgc
tgcttggaagaacagattgtcgcctcacctgccgaagcggacatggccttggtttatggc
ttgggcttcccaccattccgtggtggcgcgttgcgctatctcgatacgctgggcaatagc
aatgtggttgatcaagcgaaacgttatacctcgctcggtgctctctacgagctgcccgcg
ttgctgctgcagaaagctcaccagcatgaaagctggtatcccgccgccaaacccattgat
gaagctgcgctgaaaagcgcctga
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