Pantoea phytostimulans: ACF2G4_16675
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Entry
ACF2G4_16675 CDS
T11029
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pphi Pantoea phytostimulans
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphi03016
]
ACF2G4_16675 (truB)
Enzymes [BR:
pphi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACF2G4_16675 (truB)
Transfer RNA biogenesis [BR:
pphi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACF2G4_16675 (truB)
Prokaryotic type
ACF2G4_16675 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
XLQ79575
LinkDB
All DBs
Position
3573816..3574760
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGSVVQTRPVEFSQSELDSALESFRGDTL
QVPSMFSALKHQGRPLYEYARQGIEIEREARPITVYELQFIRWQDDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRVQVARYPFEKMVTLEQLTALATAATESGLSLEEQLDPL
LLPMDSPASDFPEVNLPLAAAAYFKQGQPVHASNSPASGLVRVYEGDERKFIGMAEIADD
GRVAPRRLVVEYQD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggccgcgatgtccatggcgttctgttactggacaagccg
caaggtgcctcttccaatgatgtcttgcaaaaagtgaagcgtatcttcaacgccaaccgc
gcaggacacacaggcgcgcttgatccactggcaaccggtatgctgccgatttgcttgggc
gaagccaccaagttttctcaatacctgttggattccgataagcgttatcgtgttattgct
cgtcttggtgagcgaacagacacgtcggatgctgacggaagcgtagtgcaaacgcgccca
gtagaatttagtcagtctgaactcgatagcgcgctagagagtttccgcggtgatactttg
caggtaccttcaatgttttcagcattgaagcatcaaggtcgcccgctctatgaatatgca
cgtcaaggcattgagattgagcgtgaagcacgtcccatcactgtttacgaactgcagttt
attcgctggcaagatgatgagcttgagctggaaatccactgttctaaaggcacttatatt
cgcaccattatcgacgatttaggtgaaaagcttggctgtggtgcgcatgtcatcatgctg
cgtcgtgtacaggttgcgcgttatccctttgagaaaatggtcacgctggagcagctcact
gcgctggctaccgcagcaacagaatccggtctttctttagaagaacagcttgatcctctg
ttgttaccgatggacagcccggcatctgattttcctgaagtgaatttgcccctggctgcc
gcagcctatttcaagcagggccagcctgtgcacgccagcaattcgcctgcctcgggattg
gttcgcgtctacgaaggtgatgagcgcaaattcatcggcatggctgaaattgccgatgac
gggcgcgtggcgccacgtcgtttggtggttgagtatcaagattaa
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