Pantoea phytostimulans: ACF2G4_21965
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Entry
ACF2G4_21965 CDS
T11029
Name
(GenBank) H-NS family nucleoid-associated regulatory protein
KO
K03746
DNA-binding protein H-NS
Organism
pphi Pantoea phytostimulans
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphi03036
]
ACF2G4_21965
03400 DNA repair and recombination proteins [BR:
pphi03400
]
ACF2G4_21965
Chromosome and associated proteins [BR:
pphi03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
ACF2G4_21965
DNA repair and recombination proteins [BR:
pphi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACF2G4_21965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Med8
DUF6626
UPF0236
Motif
Other DBs
NCBI-ProteinID:
XLQ82248
LinkDB
All DBs
Position
pC3_2:complement(284647..285048)
Genome browser
AA seq
133 aa
AA seq
DB search
MSESLSSLKNIRTLRAHARNMSVDVLEEMLQKLDMVVAERRDELKASEAEEREKAEKLAM
YRELLQEDGISVEELLSGMQSTSVGKTKRAPRPAKYKYTDENGEVKHWTGQGRTPSPIKT
AIENGQLLDDFLL
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaagtctgagcagcctgaaaaatatccgtacgctacgggcacatgcgcgcaat
atgtctgttgatgtactggaagagatgctgcaaaagttggatatggttgtggccgagcgc
cgcgatgaactgaaagcctcagaagctgaagagcgcgagaaggcagagaagttggcgatg
taccgtgagctgcttcaggaagatggcattagtgtggaagaactgttgagcggaatgcaa
tcaaccagcgtgggaaaaacgaaacgcgccccccgaccggctaaatacaaatacacggac
gagaacggtgaagtaaaacactggaccggccaaggccgtactccttctccaatcaaaacc
gcgattgaaaacggccagttgcttgatgatttcttgctgtaa
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