Pantoea phytostimulans: ACF2G4_23045
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Entry
ACF2G4_23045 CDS
T11029
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pphi Pantoea phytostimulans
Brite
KEGG Orthology (KO) [BR:
pphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphi03000
]
ACF2G4_23045
Transcription factors [BR:
pphi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ACF2G4_23045
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
HTH_23
HTH_5
HTH_20
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
XLQ82531
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Position
pC3_3:133718..134944
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AA seq
408 aa
AA seq
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MKKAHEENELKIMQIRAFCMIADRGTVSEAANKLFRTQSAITRSIRDLEHTLATPLFERH
ASGMMLTETGKCVLPRARRAVQELHLIPSVLSKLKQRDSGREEAEPIWLFNLRRLQIFLA
LHRLHHTQSVATSLGISQPAVSAALKVLEKGAGLTLFQRTPKGMMPTPAGREIAPFISRA
LNEIRHIPEDLAAHQGVLTGTVHVGALPLCRSSVLPLAIAQLVTRYPGIKVVTNESAFSA
LVTEMRAGDIDFILGALRQNDAVPDIHNQVLFDEELILLARPQHPLAGRPLTPDDLTQTQ
WILPRDNTPARHLLDRAFQALGMPAPQPVVESGDLAIVRGLLLHSDMVAAVSSHQLEYEL
RAGILTPLTLNLPDTRREIGLTFRQGALHSPATKALLSCIDETLSDTA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggctcatgaagaaaatgaattaaaaatcatgcaaatacgcgcattttgcatg
attgcagatcgcggcacagtctcggaagcagcgaacaaattatttcgtacccagtcggca
atcacccgctcaatccgtgatcttgaacacactttagccacgccgctgttcgagcgtcat
gcaagcggcatgatgctgacagaaacgggaaagtgtgttctgccgcgtgccagacgcgct
gtacaagagttacatttgattccgtcggtgctcagtaaactgaaacagcgcgacagtggg
cgcgaagaagcagaaccgatctggctgtttaacctgcgccgcctgcaaatctttttggcg
ctgcaccgccttcatcacacgcaaagcgtggcaacgtcattgggtatcagtcagcccgcc
gttagtgcagcattaaaagtgctggaaaagggagcgggattaacgctgtttcagcgtacg
ccaaaaggcatgatgcctacacccgccgggcgcgaaatagcgccttttatcagtcgcgca
ctgaatgaaatacggcatattcctgaagatctcgcggcacaccagggtgtgctgaccggc
accgtgcatgtgggtgcactgccgctgtgccgcagcagtgtgttgcctctggcaattgct
cagctggtaacgcgctaccccggtataaaagtggtgaccaatgaaagtgcctttagcgcg
ctggtaacggaaatgcgtgctggcgatattgatttcattctcggcgcactgcgtcaaaac
gatgccgtaccagatattcataatcaggttttattcgatgaggagcttattttactggcg
cgaccgcagcatccgctggctgggcgtccactgacgccagacgatttgacacagacgcaa
tggattctgccgcgtgataacacgcccgcgcgtcatttgttagatcgcgcctttcaggcg
ttaggcatgcccgcgccacagccggttgtggaaagtggagatttggcgatagtgcgtgga
ttgctgcttcattcagatatggtagccgccgtctcttcgcatcagcttgagtatgagtta
cgcgccggcattcttacgccgctgacgcttaatctgcctgatacgcgtcgtgaaattggt
ttaactttccgtcagggtgcgctgcactcacctgcgacaaaagccctgttgagctgcatc
gatgagacgctatctgacacagcctaa
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