Pseudomonas phenolilytica: HU825_02035
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Entry
HU825_02035 CDS
T08532
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pphn
Pseudomonas phenolilytica
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphn03400
]
HU825_02035
DNA repair and recombination proteins [BR:
pphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU825_02035
Archaeal homologous recombinant proteins
HU825_02035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UIP85359
LinkDB
All DBs
Position
406599..410243
Genome browser
AA seq
1214 aa
AA seq
DB search
MRILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDSVSPLNKVPEVDAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVKRAREKI
DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQRDELERE
HQAQLDELKALQQQLKALEAQRQWLSELQRLENEHEAARQQLQDAEDERDSLAEARRILD
LFEQLAPQRHRFLRLQDLGPLLDKAADSLARLQHEEQAVQQRLAELQSQCSAASEQLRSA
EQARQDAEPRLVQARREEERLQHLNADLTTIREDSTRADAEVTAGAATLTQLAERQQRAA
AELAALSQQLDKSAALQPLCSAWDGYRPRLQQAVQLAARLQQGQGELPALEAQAQAAETQ
QNVAREALDNLQRERDSDVGLAEQLARLHRQLDDWRQAERETDALQQLWAQQLTLVASQR
ELADAATVQQTELDNLVPLGKQVRIDRDAAEQALTVTLALLERQRLARSENVEALRAALI
PGEPCPVCGSHEHPWQQTDALVASLARHDDSEAERARQALQEQDQRLQELRDRHVALSTQ
LRQTQQRQSEVDAQLQALAPRLLALPAHARLLEQPEAERSQWLETQLTTLKGQITSASQR
QQQLLALQQRSETLQQAWQTAREACVEATQQLARQRDALARDSLQLDEELAAFAELLPVE
QLQRWREDPAQTFMQLDASIATRLQQLQTQAELAEELRQCEQRRSDEQLQQRHRQEKQAG
CNARLAEREKLLLACQQALRTSLGEHGSASAWQQQLDATIQAARQTQAEIDQQLNESKLG
LTRLHSEQQNCRQRHAELQQERDALNAELATWRVGHPQLDDATLAQLLHMDDQLIAEARQ
RLRENSENLTRCRERLDGCLNRLNLHNQQQSETPDAEQLQQRHAEQLQQCELADQHCAET
RARLIDDDKRRSQSQALLAEIDAARAEHQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
QRQGNGQSALKIVG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctcgccatccgcctgaagaacctggcatcgctggctggtgagcaggtcatc
gacttcaccgcggaacccctggccagcgccgggttgttcgccatcaccgggcccaccggc
gccggcaagagcaccattctcgacgccctgtgcctggcgctgttcggcagcacgccgcga
ctcgacagcgtttcgccgctgaacaaggtgcccgaggtggatgccgagatcggcggtggc
gacgagcgcaacctgctgcgccgcggctgcggcagcggctacgccgaggtcgatttcgtc
ggcgtcgacggccaccgctaccgcgcacgctgggaggtcaagcgcgcccgcgagaagatc
gacggccgcctgcaggccagcagccagagccttacggatctcgacagcggcacgctcctg
gccagcggcaagaaacgcgaattcaaggaattgctcgaagcccgccttggactgaccctg
gcccagttcacccgcgccgtgctgctggcgcagagcgaattttccgccttcctcaaggcc
gacgacaacgagcgcggcaccctcctggaaaagctcaccgataccggcctctacagtcgc
ctcggccaggccgcgttcgaggccgccaaggaggcgaaggaaggcctcgcccgtctggaa
cagcaggccggtggcctgcagccactggagccggagcagcgtgacgaattggagcgcgaa
catcaggcccagctcgacgaactgaaagcgctgcagcagcagctcaaggcgctggaagcg
cagcggcaatggctcagcgaactgcagcgtctggaaaacgagcacgaagccgcacgccag
caactgcaggacgccgaagatgagcgcgacagccttgccgaggcccggcgcatcctcgac
ctgttcgagcaactggcgccgcaacgccatcgtttcctgcgtctgcaggatctcggcccg
ctgctggacaaggccgccgacagcctggcgcgcctgcagcatgaggaacaggccgtgcag
cagcgcctggccgagctgcagagccaatgcagcgccgccagcgagcaactgcgttcggcc
gaacaggcgcgccaggacgccgagccgcggctcgtccaggcgcgccgtgaggaggaacgc
ctgcagcatctgaacgccgacctgaccactatccgcgaggacagcacccgggccgatgcc
gaggtgactgcaggcgcagcgacgctcacgcagctcgccgagcgccagcagcgcgccgcc
gcggaacttgccgcgctgagccagcaactggacaagagcgccgcgctgcaaccgctctgc
agcgcctgggacggctaccgcccgcgtctgcaacaggccgtccagctggcggcacgtctg
cagcaaggtcagggcgagctccccgcgctggaagcgcaggcccaggccgccgaaacccag
cagaatgtggcccgcgaggcactggacaacttgcaacgcgagcgcgacagcgacgtcggg
ctggccgaacagctggcccggctgcatcgacagctcgacgactggcgccaggccgagcgc
gaaaccgatgcgctacagcagctctgggcgcagcagctgacgctcgtcgccagccagcgc
gaactggccgacgccgccaccgtccagcagaccgagctggacaaccttgtcccgctgggc
aaacaggtccgcatcgatcgagatgcggccgagcaggcgctcacggtcacccttgcgctg
ctcgaacgccagcgtctggcacgcagcgagaatgtcgaggcgctgcgcgcggcgctgatc
cccggcgagccctgcccggtctgcggcagccacgagcatccctggcaacagaccgatgcg
ctggtcgccagccttgctcggcacgatgacagcgaggccgagcgcgcgcgtcaggcacta
caagaacaggaccagcgcctgcaggagctgcgcgatcgccatgtcgcgctcagcacacag
ttgcgccagacccagcagcgccagagcgaagtcgacgcgcagctgcaggccctggcgccg
cgcctgctcgccctgcccgcgcacgcacgattgcttgagcagcctgaagccgagcgttcg
caatggttggaaacgcagctgacgactctcaaaggccagatcaccagcgccagccagcgt
cagcagcaattgctcgccctgcaacagcgcagcgaaaccctgcagcaagcctggcagacc
gcgcgcgaggcctgtgtcgaggcgactcaacagctcgcgcgccagcgcgatgccttggcc
cgcgacagcctacaactcgacgaggagctggcggcctttgccgaactgctgcccgtcgag
caactgcagcgctggcgcgaagatccggcgcagacctttatgcagctggacgccagcatc
gccacgcgattgcagcaactgcagacgcaagccgagctggccgaggagctgcgccagtgc
gagcagcgccgcagcgacgaacagctgcagcagcgccatcgccaggagaagcaggctggc
tgcaacgcgcgactggctgagcgcgaaaagcttctgctcgcctgccagcaggcgctgcgg
accagccttggcgagcatggcagcgccagcgcctggcaacagcagctggacgcaaccatc
caggctgcgcggcaaacccaggccgagatcgaccagcaactcaacgagagcaaacttggc
ctgacgcgcctgcacagcgagcaacagaactgtcgccagcgccacgccgaattgcagcag
gaacgcgacgcgctgaacgcggaactagcgacctggcgcgtcggccatccgcagctggat
gacgccaccctcgcgcagctgttgcacatggacgaccagctgatcgccgaggcgcgacag
cgcttgcgagagaacagcgaaaacctgacccgctgtcgcgaacgtctggatggctgcctc
aatcgcctgaacctgcacaaccagcagcagagcgaaacaccggatgccgagcagctgcag
cagcgccacgccgaacaactgcagcagtgcgagctggccgaccagcactgcgcggaaacc
cgcgccaggctgatcgacgacgacaaacgccgcagccagagccaggcgctgctcgccgag
atcgacgcggcgcgcgccgagcaccagcgctgggggcgtatcgctgcgctgatcggttcc
agcgacggcggtgccttccgcaagatcgctcaggcctacaacctcgatctgctggtgcag
cacgccaacgtgcagctgcgccaactggcgcggcgctaccggctcaagcgcggcggcagc
ccgctggggttgctggtgatggataccgaaatgggtgacgagctgcgctcggtgcattca
ctgtccggcggcgagaccttcctcgtctcgctggcgctggcgctgggcctggcctcgatg
gcttcgagcaagctcaggatcgagtcgctgttcatcgacgaaggcttcggcagtctcgat
cccgagtcgctgcagatcgccatggatgcgctggattcgctgcaggcccagggccgcaag
gtggcggtgatcagccacgtcgcggagatgcacgagcgcattccggtgcagatccaggtg
cagcgccagggcaacggccagagtgcgctgaagatcgtcggttga
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integrated database retrieval system
