Pseudomonas phenolilytica: HU825_02265
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Entry
HU825_02265 CDS
T08532
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU825_02265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pphn02022
]
HU825_02265
02035 Bacterial motility proteins [BR:
pphn02035
]
HU825_02265
Two-component system [BR:
pphn02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HU825_02265
Bacterial motility proteins [BR:
pphn02035
]
Pilus system
Twitching motility proteins
HU825_02265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
Pre_tape_measure
AAA_5
VpsR
AAA_19
HTH_30
Mg_chelatase
AAA_22
DUF3146
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UIP85397
LinkDB
All DBs
Position
457365..458705
Genome browser
AA seq
446 aa
AA seq
DB search
MSARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEAREWLAREHYDLCLTDMRLPD
GSGLELVQLIQQQHPQLPVAMITAYGSLDTAISALKAGAFDFLTKPVDLNRLRELVSTAL
RVRSAPTEAAPVDSRLLGSSPPMKVLRKQIDKLARSQAPVYISGESGSGKELVARLIHEQ
GPRSERPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQVANGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGTQEVLVDVRILCATHKDLAGEVAAGRFRQDLYYRLNVI
ELRVPPLRERREDIALLADAMLRRLAQECGDSPAHLHPDALAKLLAYRFPGNVRELENML
ERAYTLCDGDEIKAADLRLADSPGPGESGEVSLAQIDSLEDHLEEIERKLIMQALEETRW
NRTAAAQRLGLTFRSMRYRLKKLGLD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgccagaaagcactgatcatcgatgacgagcccgacattcgcgaactcctg
gaaatcaccctggggcgcatgaagctcgacacccgcagcgcccgcaacctcaaggaggcc
cgcgagtggctggcgcgcgagcactatgacctgtgcctgaccgacatgcgcctgcccgat
ggcagcggactggagctggtgcagctcatccagcaacagcacccgcagctgccggttgcg
atgatcaccgcctacggcagcctggacaccgccatcagcgcgctcaaggccggcgccttc
gacttcctgaccaagccggtcgatctcaaccgtctgcgcgagctggtcagcaccgcactg
cgcgtacgcagcgcccccaccgaagcggcacctgtggacagccgtctgctcggcagctca
ccgccgatgaaggtgctgcgcaagcagatcgacaaactcgcccgcagccaggcgccggtc
tacatcagcggcgaatccggcagcggcaaggagctggtggcgcggctgattcacgaacag
gggccgcgcagcgagcggccgttcgtaccggtcaactgcggagcgattccctcggaactg
atggagagcgagttcttcggtcacaagaagggcagcttcagcggtgccatcgaagacaaa
cccggactgttccaggtagccaatggcggcaccctgttcctcgacgaagtagccgacctg
ccgctgccgatgcaggtcaagttgctgcgcgccattcaggaaaaagccgtgcgcgcggtt
ggcggcactcaggaagtgctggtcgatgtgcgcatcctctgtgccacccacaaggatctc
gccggcgaagtcgccgccgggcgcttccgtcaggacctgtactaccgcctcaacgtcatc
gaactgcgcgtgccgccgttgcgcgagcgtcgcgaagacatcgccctgctggccgatgcg
atgttgcgccgcctggcgcaggaatgcggcgacagcccggcgcacctgcaccccgacgcc
ttggcaaaattgctggcctaccgctttccaggcaacgtgcgcgaactggagaacatgctc
gaacgagcctacaccctgtgcgacggcgacgagatcaaggctgcggacctgcgcctggcc
gacagccccggcccaggagaaagcggagaagtcagcttggcgcagatcgacagtctggaa
gaccatctggaagaaatcgaacgcaagctgatcatgcaggcgctcgaggaaacccgctgg
aaccgcaccgccgcggcacagcgcctggggctgaccttccgctcgatgcgttatcgactg
aagaagctcggcctggattga
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