Pseudomonas phenolilytica: HU825_04330
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Entry
HU825_04330 CDS
T08532
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn00521
Streptomycin biosynthesis
pphn00523
Polyketide sugar unit biosynthesis
pphn00525
Acarbose and validamycin biosynthesis
pphn00541
Biosynthesis of various nucleotide sugars
pphn01100
Metabolic pathways
pphn01110
Biosynthesis of secondary metabolites
pphn01250
Biosynthesis of nucleotide sugars
Module
pphn_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU825_04330 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU825_04330 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HU825_04330 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU825_04330 (rfbB)
00525 Acarbose and validamycin biosynthesis
HU825_04330 (rfbB)
Enzymes [BR:
pphn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HU825_04330 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UIP85790
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All DBs
Position
909014..910087
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AA seq
357 aa
AA seq
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MRILVTGGAGFIGSALIRHLIHDTEHSVLNLDKLTYAGNLESLAAVEDHPRYQFLQADIA
DRERVSEALLDFQPDAIMHLAAESHVDRSIDGPAEFIQTNIVGTYQLLEAARAYWQSLPA
ERREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLVTNCSNNYGPFHFPEKLIPLVILNALDGKPLPVYGDGAQVRDWLFVEDHARALLTVVS
KGKVGETYNIGGHNEQKNIDVVRSICALLEELAPHKPAGVARFEDLITFVKDRPGHDLRY
AIDASKIERELGWVPQETFQSGLRKTVQWYLNNLEWCRRVQDGSYQRERLGALENIA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcgtaactggcggggccggattcatcggctcggcactgattcgccacctc
atccacgataccgagcacagcgtgctcaacctggacaaactgacctacgccggcaatctc
gagtcgctggccgccgtggaagaccatccgcgctatcagttcctccaggccgacatcgcc
gatcgtgagcgggtcagcgaggcgctgctggacttccagccggacgccatcatgcacctg
gccgccgaatcgcacgtcgaccgttccatcgacggcccggccgaattcatccagaccaac
atcgtcggcacctatcagctgctggaagccgcccgcgcctactggcagagcctgccggcc
gaacgccgcgaggccttccgcttccaccacatctccaccgacgaggtgtacggcgacctg
cacggcaccgacgacctgttcaccgagaccacaccctacgcacccagctcgccctactcg
gcgagcaaggccgcgtccgatcacctggttcgcgcctggcagcgcacctacggcctgccg
gtgctggtgaccaactgctcgaacaactacgggccgttccacttccccgagaagctgatc
ccgctggtgatcctcaacgcgctggacggcaagccgctgccggtctacggcgacggcgcg
caggttcgcgactggctgttcgtcgaggaccacgcccgcgcgctgctgacggtggtgagc
aagggcaaggtcggcgagacctacaacatcggtggccacaacgagcagaagaacatcgac
gtggtgcgcagcatctgtgcgctgctcgaagagctggcgccgcacaagccggccggcgtg
gcgcgcttcgaggacctgatcaccttcgtcaaggatcgcccgggtcatgacctgcgctac
gccatcgacgccagcaagatcgagcgcgagctcggctgggtgccgcaggaaaccttccag
agcggcctgcgcaagaccgtgcagtggtacctgaacaacctcgaatggtgccgtcgcgtc
caggacggcagctatcaacgcgagcgccttggcgcgctggagaacatcgcatga
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