Pseudomonas phenolilytica: HU825_05705
Help
Entry
HU825_05705 CDS
T08532
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn02020
Two-component system
pphn02025
Biofilm formation - Pseudomonas aeruginosa
pphn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU825_05705
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU825_05705
09142 Cell motility
02040 Flagellar assembly
HU825_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphn03021
]
HU825_05705
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pphn02035
]
HU825_05705
Transcription machinery [BR:
pphn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU825_05705
Bacterial motility proteins [BR:
pphn02035
]
Flagellar system
Flagellar assembly proteins
Stator
HU825_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
UIP86056
LinkDB
All DBs
Position
1190586..1191317
Genome browser
AA seq
243 aa
AA seq
DB search
MSATCPVDHYSVAPSAPVLFAPGAEQRWLMQYLPLVKRIVRQLSLQANQVLDREDMEQIG
MMGLLEGLRRYGEPDEQFGRFAALRIRGAILDELRRQDWRPRQVRQQAHKVRDAIRELGR
QLGHPPTEEEIKAFTGLEDKDYQDFLWADSSEAIESLDALLQSGHEHFPDAAELFEERLL
KERLLEQALSQLDERERLVLTLYYQHELSLKEIALVLEVSDARVCQLSKQAIGKACRFLT
ERN
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacctgtcccgtcgatcactacagcgtcgcgccgagcgctccggtgctgttc
gccccgggtgccgagcaacgctggttgatgcagtacctgccgctggtcaagcgcatcgtc
cggcagctgtcgctgcaggccaatcaggtgctcgaccgcgaggacatggagcagatcggc
atgatgggtctgctcgagggactgcgccgctacggcgagccggacgagcagttcgggcgc
ttcgccgcgctgcgcattcgcggggcgattctcgacgagttgcgccggcaggactggcgg
ccgcgtcaggtgcgccagcaggcgcacaaggtgcgcgacgccatccgcgagctggggcgc
cagttgggacatccgccgacggaggaggagatcaaggccttcaccggtcttgaggacaag
gactaccaggacttcctctgggccgactcgtccgaggccatcgagagcctggatgcgctg
ctgcagagcggtcacgagcattttcccgacgctgccgagctgttcgaggagcgtctgctg
aaggaacggctgctggaacaggcgctgagccagctggacgagcgcgagcgcctggtgctc
acgctctattaccagcatgagctgagcctgaaggaaatcgccctggtgctggaagtcagc
gatgccagggtctgtcagctgagcaagcaggcgatcggcaaggcctgtcgcttcctaacc
gagagaaactag
DBGET
integrated database retrieval system
