Pseudomonas phenolilytica: HU825_05835
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Entry
HU825_05835 CDS
T08532
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU825_05835 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pphn02044
]
HU825_05835 (tssK)
Secretion system [BR:
pphn02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU825_05835 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UIP86082
LinkDB
All DBs
Position
complement(1218763..1220094)
Genome browser
AA seq
443 aa
AA seq
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MSLHKVVWQEGMLLRPQHFQQSDRYYDHQLKTRTQKLSSYAWGFFNLEIDRQFLNMGKLV
LSQASGILPDGTLFELGSEREPLALDIPPNTGSTPVYLALPLVTGNHIETRRPEQKDVLA
RYTAHELDVADSNAGDSSTSQVSTGLPDFRLLLGEQQSDQAYVKLQLCEVLDTTPDGVIS
LDPEFIPTYVNFQASGYLLSCLKEVISMLAHRGDTLAERISATGKVGGAEVGDFMMLQLI
NRHEPVLRHYLGVEQVHPEQIYRDLLGLLGELATFSSESKRPRLDGRYQHSDQGASFRKL
MDAIRQVLSMVLEQHAIELLLQQRQYGIQVSPLHDHKLLGTASFVLAASAQCDSETLRTR
LPAHLKIGPVERIRQLVNLHLPGIRLKPLPVAPRQIPFHAGKTYFALELSAEDQAQLERS
GGFAFHVSGDFAGLELKFWAVRD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcacaaggttgtctggcaggaaggcatgctgctgcgcccgcagcacttccag
caaagcgatcgatattacgatcaccaactcaagacgcgcacccagaagctgagcagctat
gcctggggattcttcaatctggagatcgaccgccagttcctcaacatgggcaagctggtg
ctcagccaggccagcggcatcctcccggacggtacgctgttcgagctgggcagcgagcgc
gagccactggcgctggacattccgccgaacaccggcagtacaccggtatacctcgcgctg
ccactggttaccggcaaccacatcgaaacgcgtcgtcccgaacagaaggatgtgctggcg
cgctacaccgcccatgagctggatgtcgccgactccaatgccggcgacagcagcaccagc
caggtcagcaccggcctgccggattttcgcctgctgctgggcgagcagcagagcgaccag
gcctacgtgaagctgcagctgtgcgaggtgctggacaccacgccggacggggtcatcagc
ctcgaccccgagttcattcccacctacgtcaacttccaggcttcgggctacctgctgtcc
tgcctgaaggaagtgatcagcatgctcgcccaccgcggcgataccctcgccgagcgcatc
agcgccaccggcaaggtcggtggcgccgaggtcggcgacttcatgatgctgcagctgatc
aaccgtcacgaaccggtgctgcgccactacctgggcgtggagcaggtgcacccggagcag
atctaccgcgacctgcttggcctgctcggcgagctggcgaccttctccagcgagagcaag
cgcccgcgcctggacggccgttaccagcacagtgaccagggcgcgagcttccgcaagctg
atggacgcgatccgccaggtgctgtcgatggtgctcgagcagcacgccatcgaactgctg
ctgcagcaacgccagtacggcatccaggtatcgccactgcacgatcacaagctgctcggc
accgcctccttcgtgctcgccgccagcgcccagtgcgattcggaaacgctgcgcacccgc
ctaccggcgcacctgaagatcggcccggtggagcgcatccgccagctggtcaacctgcat
ctgccgggtatccgcctcaagccgctgccggtggcgccgcggcagatccccttccatgcc
ggcaagacctatttcgccctggagctcagcgccgaggaccaggcgcaactggagcgttcc
ggcggctttgccttccatgtgtccggtgacttcgccgggctcgaactgaaattctgggcg
gtcagggactga
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