Pseudomonas phenolilytica: HU825_05860
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Entry
HU825_05860 CDS
T08532
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn02025
Biofilm formation - Pseudomonas aeruginosa
pphn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU825_05860 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU825_05860 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pphn02044
]
HU825_05860 (tssH)
Secretion system [BR:
pphn02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU825_05860 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
AAA_22
ClpB_D2-small
nSTAND3
TniB
NACHT
AAA_7
Sigma54_activat
Clp_N
ResIII
AAA_24
AAA_25
Mg_chelatase
Hpr_kinase_C
Relaxase_C
AAA_6
Motif
Other DBs
NCBI-ProteinID:
UIP86085
LinkDB
All DBs
Position
complement(1223670..1226267)
Genome browser
AA seq
865 aa
AA seq
DB search
MKMINVDLQQLVQALDAPSKQDLEGAAERCVVRGGSKVLVEDLLLGLLERPDGLLKRALL
DAEVDTGTLAQALQPRGERSESRNPVFSTELVQWLQDALLVASLELGQSQIDQAALILAL
LRNPLRYAGSHYQPLLARLDAERLRDFALSQQLQGSTGKPAAGVESNLARFTHNFTQQAR
DGKLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALRIVSGEVPAALK
GVELLCLDLGLLQAGASVKGEFERRLQGVIDEVKALSKPIILFIDEAHTLIGAGGQAGSG
DAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPSVPEAVTILRGL
APVYEKSHGIYLRDDAVTAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPEALE
RLRGEVAEGERQREAMRRDLAAGLPVDASVLERLEQRLFTAGDEIEQLESRWTRQRQLAE
RLLELRKRTAEARSDANEDGEAPSLDELEAELRTVQAELAVAQAEQRLVSHEVCPRLVAE
VISHWTGVPLTQLAREHNAQVANFAADLRARVRGQEQAVEALDRAMRAAAAGLNKPDAPV
GVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHSVSRLIGAPPGYVGYGE
GGMLTEAARQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMTS
NLASERIASFCSAGQRPTAEDLELAIRPQLSQHFKPALLGRMRVVPYYPIAGEVLDELVA
LKLARFGERLQRRQLQFSHCPALVTHLSERCCDSDSGARLIDHLIEQHLQPLVVDRLLDA
MASGEPLQRVHATLDGDGALVCEFA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaacgtcgacttacagcaactggtgcaagccctggatgcccccagtaaa
caggatctggaaggcgcagccgaacgctgcgtggtacgtggcggcagcaaggttctcgtc
gaggacctgctgctcggcctgctcgagcgtcccgatggattgctcaagcgagccttgctg
gatgccgaagtcgataccggcacactggcgcaggcgctgcaaccgcgaggcgagcgcagc
gagtcgcgcaacccggtgttttccaccgaactggtgcaatggctacaggatgccctgctg
gtggccagtctggaactcggccagagccagatcgaccaggccgcactgattctcgcgctg
ctgcgcaatccgctgcgctatgcaggcagtcattaccagccattgctggcccggctggat
gccgagcgcctgcgcgacttcgccctaagccagcagcttcaaggcagcactggcaaacct
gccgccggtgtggagtcgaacctagcgcgctttacccacaacttcacccaacaggcccgt
gacggcaagctcgatccggtgctctgccgcgactcggcgattcgccagatgatcgacatc
ctcgcccggcggcgaaagaacaatccgatcgtggtcggcgaagctggggtcggcaagacc
gctatcgtcgaaggcctggcgctgcgcatcgtcagcggggaagtgcctgcggcactgaag
ggcgtcgagctgctctgcctggacctcggcctgctgcaagccggtgccagcgtgaagggc
gaattcgaacgccgtctgcagggcgtgatcgacgaggtgaaggccttatccaagccgatc
atcctgtttatcgacgaggcgcataccctgatcggcgccggcggccaggccggcagcggc
gatgcggccaacctgctcaagccggcactggcacgcggcgagctgcgcaccatcgctgca
acgacctggagcgagtacaagaaatacttcgagaaggacccggcactggcccggcgcttc
cagccggtgcagctgcacgagccgagcgttccggaagccgtcaccatcctgcgcgggctg
gcgccggtctacgaaaagagtcatggcatctacctgcgcgatgatgcggtcacggccgcc
gccgagttgtcggcacgctacctggccggccggcagctgccggacaaggccgtcgacgtg
ctggataccgcctgcgcgcgggtgcgcatcagcctcgccgccgcgcccgaggcgctggaa
cgcctgcgtggtgaggtcgccgaaggcgagcgccagcgtgaagccatgcgccgcgatctg
gccgccggcctgccggtcgacgcgtctgtcctcgagcgactggagcaacgtctgttcacg
gcgggggacgaaatagagcagctcgaatcccgctggaccaggcagcgccagctcgccgag
cgcctgctcgagctgcgcaaacgcaccgccgaagcccgcagcgatgcaaacgaggacggc
gaggccccatcgctcgatgagctggaggccgagctgcgcaccgtacaggcagaactcgcc
gtagcccaggccgagcaacgactggtcagccatgaggtctgcccgcgcctggtggctgag
gtgatcagccactggaccggtgtgccgctgacgcagctggcgcgggagcacaacgcccag
gtcgccaacttcgccgccgatctgcgcgcccgggtgcgcggtcaggaacaggccgtggaa
gcgctggatcgtgccatgcgcgcggcagcggccgggctgaacaagcccgacgctccggtg
ggcgtgttcctgctggtcggccccagcggcgtcggcaagaccgaaaccgccctcgccctg
gccgacctgctgtacggcggcgagcgtttcctcaccgtgatcaacatgtccgagttccag
gagaaacacagcgtttcccgcctgatcggcgcacctccgggttacgtcggctacggcgaa
ggcggcatgctcaccgaagcggcgcggcagaaaccctactcggtgatcctgctcgacgag
gtggagaaggcggatccagacgtgatgaacgtcttctatcagatcttcgacaagggcgtg
gctaatgacggcgaaggccgcgagatcaacttccgcaacaccctgatcctgatgaccagc
aacctcgccagcgagcgcatcgccagtttctgcagcgccgggcagcggccgacggccgag
gacctggaactggccatccgtccgcagctgtcgcagcacttcaagccggccctgctcggg
cgcatgcgcgtggtgccctattacccgatcgctggtgaggtgctcgacgagctggttgcg
ctcaagctggcacgcttcggtgagcgcctgcagcgtcgccagctgcagttcagccactgc
ccggcgctggtcacgcacctctccgagcgctgctgcgacagcgacagcggtgcgcgcctg
atcgaccatctgatcgagcagcacctgcaaccactggtggtggaccgcctgctcgatgcc
atggccagtggcgagccgctgcagcgggtgcatgccacgctggatggcgacggcgcgctg
gtctgtgagttcgcctga
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