Pseudomonas phenolilytica: HU825_06005
Help
Entry
HU825_06005 CDS
T08532
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn00450
Selenocompound metabolism
pphn00970
Aminoacyl-tRNA biosynthesis
pphn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HU825_06005
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HU825_06005
Enzymes [BR:
pphn01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
HU825_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UIP86112
LinkDB
All DBs
Position
complement(1250950..1252359)
Genome browser
AA seq
469 aa
AA seq
DB search
MSSAHLPSVDRLLRAPACQPLQQRYGRQALLNTLRDLLDELREPARNGQLAALELSEAVL
AGRAGERLASQHRSRVRRVFNLTGTVLHTNLGRALLPDEAIEAITLAARYPLNLEFDLST
GKRGDRDDLIEGLIRELTGAEAVTVVNNNAAAVLLALNSLGARKEGIISRGELIEIGGAF
RIPDIMARAGVKLVEVGTTNRTHAKDYEAAITPRSGLLMRVHTSNYSVQGFTASVATRAL
ADIAHAHDLPLLEDLGSGSLVDLSRWGLPKEPTVQEALRDGADIVTFSGDKLLGGPQAGL
IVGSRELIAKIKKNPLKRALRVDKLTLAALEAVLNLYRDPDRLAERLTSLRLLSRAQAEI
RVQAERIAPALATVLGETWQVAVTDALGMIGSGAQPVARLPSAALCIRPQQPKRLRGRSL
RQLEEALRCLPIPVLGRIDDDALWLDLRQLDDEPAFLQQLVQLQEELAI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgctcatctgccttcggtcgaccggctgctgcgcgctccggcctgccagccg
ctgcagcaacgctatggccgtcaggcgctgctcaacaccctgcgcgacctgctcgacgag
ctgcgcgagccagcccgcaacggccagctcgccgcgctggagctgtccgaggcggtgctc
gccgggcgtgccggtgaacgcctggccagccagcaccgcagccgcgtgcgccgcgtgttc
aatctcaccggcacggtgctgcacaccaacctcggccgcgcgctgctaccggacgaggcc
atcgaggcgatcaccctcgccgcgcgctatccgctcaacctggaattcgacctgtcgact
ggcaagcgcggcgatcgcgacgatctgatcgaaggcttgatccgcgagctgaccggcgcc
gaggccgtcaccgtggtcaacaacaacgccgccgccgtgctgctggccttgaacagcctt
ggcgcgcgcaaggaaggcatcatctcccgcggcgaactgatcgagatcggcggcgccttc
cgcatccccgacatcatggcgcgcgccggcgtgaagctggtcgaagtcggcaccaccaac
cgcacccacgccaaggattacgaagcggcgatcaccccgcgctcgggcctgctgatgcgc
gtgcacaccagcaactacagcgtgcagggcttcaccgccagcgtcgccacccgcgcgctg
gccgacatcgcccacgcccacgatctgccgctgctggaagacctgggcagcggcagcctc
gtcgacctttcgcgctggggcctgccgaaggagcccaccgtgcaggaagcgctgcgcgac
ggtgccgacatcgtcaccttcagcggcgacaaactgctcggcggtccccaggcggggctt
atcgtcggcagtcgcgagctgatcgcgaagatcaagaagaacccgctcaagcgcgccctg
cgcgtcgacaagctgacccttgccgcactggaagcggtgctcaacctctatcgcgacccc
gatcgcctggccgagcgcctcaccagcctgcgcctgctcagccgcgcgcaggccgagatc
cgtgtccaggccgaacgcatcgccccggcgctggccaccgtgctcggtgaaacctggcag
gtcgcggtaaccgacgcgctcggcatgatcggcagcggcgcccagccggtggcacgcctg
cccagcgccgcgctgtgcattcgcccgcagcaacccaagcgcctgcgcggccgcagcctg
cgccagctggaagaagcgctgcgctgcctgccgattccggtgctcgggcgcattgacgac
gacgcgctctggctcgacctgcgccagctcgacgacgagccggcctttctccagcaactg
gtgcaactgcaagaggagctggcgatttga
DBGET
integrated database retrieval system
