Pseudomonas phenolilytica: HU825_06300
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Entry
HU825_06300 CDS
T08532
Name
(GenBank) PAS domain S-box protein
Organism
pphn
Pseudomonas phenolilytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_3
PAS_9
PAS_8
HATPase_c
GAF
Response_reg
GAF_2
PAS_7
HisKA
HPTransfase
Diguanyl_cycl_sensor
PAS_11
RPN6_N
DUF3053
Motif
Other DBs
NCBI-ProteinID:
UIP86164
LinkDB
All DBs
Position
complement(1322317..1327044)
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AA seq
1575 aa
AA seq
DB search
MDSRAEHFLNTDHSTHAREWTESQRLTALARYFVPGSLCDADFHDLLALAAELCAAPAAA
LHLITAEQQHCPTALGADRTTVPRNGTASAWAIEHAESLAFLQADCLPDGVELPHLADGT
PAASYAAAVLRTADGLPLGTLCVLDREPRVLDADAGRRLQSLGRQAMAQLELLRDRHIID
SVIDHAVITLDLQGRITSWNEGAHRILHWDAEQMLGHCFSELLAEQNSQDVTRQALQDAL
AQGSAVHQRWYRRRDGSRFWGSGTLTVLREGSQPHGFIKIMRDLTALQAEQAATRAAEER
YRTLVNLSPQVVWQCDADGALTFCNSYWSDFTGLDEDASRGDGWLAAVAEAERTTLAQQW
RQAVQGRLPFSLDLPLIAADASTRWFQLSAAPVYDSAGAVQHWLCVAHDIDNRRRAQAQQ
LESEAFTRLLLDSASEGFYSIDRSGAVTLCNQAFLTLLGFESRDQVLGRHLHRIIHHSHP
DGSDYPVHDCPIQHTAVTGEPREVDYELFFRQDGSSLPVAYRVAPIYRDGELQGAICTFT
DISERTHGDALQAFLLEISDRLQEDDTQVDIGCVLDERLGRLTRTDCIAYGHLEDATTLV
VSRQWRAANSPDRLGRHPLGSSAEVLAQHLAQGSILVLENLLDAADDSQPRQLHASLASQ
SLLFAPLPISAQQPNRLFLLFASRLPRHWNQADVALVREVVDRIRNASQRASANRALREA
EQRVSLANEIASIGVWEYNDTHHSMHWDAQLKALAGLSPEQPAPRVDEVLARVHPDDRAE
LLAALGRALQGKDGGEFQLDYRVLDTRTAQFRWLTNRGRRVLDANGEVRILGTARDITAE
RNAAEHMLRMNALLEQQISERRLAEQRQTALIELGDLLREQHDSQTIAHAAVSVIGGTLG
VARVLFASIEPGSLYATIERYWSDGASRDSSERVHFPDFGDLYYDLQNNDLVVIDDVLHD
ARTVAQTDLYSERQIRSLVCVPLFEQGQLAAALMLLHGEPRIWLDDDISFIREVADRAWN
ADERMRAERALRESEEQFRTLADNISQFAWMADPSGRIYWYNKRWYDYTGTTFEAMRALG
WRAVNHPDHHERVSASLRRAFAIGSVWEETFPLRGKDGIYRWFLSRALPIRDDFGQVTQW
FGTNTDITAQVAAEEALRELNESLERRVAERTRELAAINSRLHIEMAERERAEEALRHAQ
KMEAIGQLTGGLAHDFNNMLTGVLGALDLIQRRVNNGSSADLHRYIDAAMTSANRAAALT
HRLLAFARRQSLDPKPVDVNQLVVSMEDMLRRTIGEHIRLHTQLQADAWLAYTDAHQLEN
ALLNLVINARDAMPSGGDLQVRTRCVQIDSAQPNGPEPGDYVVLSIADSGAGMSAEVIAK
AFDPFFTTKPIGQGTGLGLSMVYGFAKQTGGHVHIDSTPGEGTRITLYLPRNHSTLEESA
NTPAPAEVPQAQHGETVLVVEDEAAVRMLVIEVLHELGYAALEACDAASALPYLQSEQRI
DLLVSDFGLPGLNGRQLADLARQQRPQLKVLFITGYAADATVRGDFLGPGMDMLAKPFSI
DALGQRIRQLIERDG
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggacagccgagcagaacacttcttgaacaccgatcacagcacgcacgccagggaatgg
accgaatcccagcgcctgaccgcactggcgcgttacttcgtgccgggcagcctgtgcgac
gcggactttcacgatctgctcgcgctcgccgccgagctttgcgcggcaccggcggctgcg
ctgcacctgatcaccgccgagcagcagcattgcccgacggccctcggcgccgaccgcacg
accgtgccacgtaacggaacggcgagcgcctgggccatcgagcatgccgaatcgctggcg
ttcctgcaggccgactgcctgccggacggcgtcgagctgccacacctggccgacggcaca
ccggccgcctcctacgcggcggccgtcctgcgcaccgccgacggcctgccgctgggcacg
ctgtgcgtgctagaccgcgagccgcgcgtgctcgacgcggacgccgggcgacgcctgcag
tcgctgggccgccaggcgatggcgcagctggagctgctgcgcgaccgccacatcatcgac
agcgtgatcgaccacgcggtcatcacgctggacctgcaaggccgcatcaccagctggaac
gagggcgcccatcgcatccttcactgggacgccgaacagatgctcggccattgcttcagc
gaactgctcgccgagcagaacagtcaggacgtaacccgccaggcgctgcaggatgcgctg
gcgcaaggctccgctgtgcaccagcgctggtatcgccgacgcgacggtagccgcttctgg
ggcagcggcacgctcaccgtactgcgggaaggatcgcaaccgcacggcttcatcaagatc
atgcgcgacctcaccgcactgcaggccgagcaggccgccacccgcgccgccgaggagcgt
taccgcacgctggtcaacctcagtccgcaggtggtctggcagtgcgacgcggatggcgcg
ctgacgttctgcaacagctactggagcgacttcaccgggctcgacgaggatgcctcgcgc
ggcgacggctggctcgcggcggtagccgaggcggaacgcacgacgctggcgcagcagtgg
cgacaggcagtacagggccggctgccgttcagcctcgacctgccgctgatcgccgccgat
gccagcacgcgctggttccagctgagcgccgcgccggtctatgacagcgccggcgcggtg
cagcactggctctgcgtcgcccacgatattgacaaccggcgccgcgcccaggcgcagcag
ctggaaagcgaagccttcacccgcctgctgctcgactcggccagcgaaggcttctattcc
atcgaccgcagcggcgccgtgaccctgtgtaaccaggcgttcctcaccctgctcggcttc
gaaagccgcgaccaggtgctcgggcgccacctgcaccggatcatccatcacagccatccg
gacggcagcgactacccggtgcacgactgtccgatccagcacaccgccgtcaccggcgag
ccgcgcgaggtcgattacgagctgttcttccgccaggacggcagcagcctgccggtggcc
taccgggtcgcgccgatctaccgcgacggcgagctgcaaggcgcgatctgcaccttcacc
gacatcagcgagcgcacccacggcgacgcgctgcaggccttcctgctggagatcagcgac
cggctgcaggaagacgacacgcaggtcgacatcggctgcgtgctggatgaacgcctcggc
cggctgacgcgcaccgactgcatcgcctacggccatctggaggatgccaccacgctggtg
gtcagccgccaatggcgtgccgcgaacagccccgaccggctgggtcgacacccgctcggc
agcagcgccgaggtgctggcccagcacctggcgcagggcagcatcctggtgctggaaaac
ctgctcgacgccgccgacgactcgcagccgcggcaactgcacgccagcctggccagccag
agcctgctgttcgctccgctgccgatttccgcgcagcagcccaaccggctgttcctgctg
ttcgccagccggctgccgcgtcactggaaccaggccgatgtcgcgctggtgcgcgaagtg
gtcgaccgcatccgcaatgccagccagcgcgccagcgccaaccgcgcgctgcgcgaagcg
gaacagcgcgtcagcctggccaacgaaatcgcctcgatcggcgtctgggaatacaacgac
acccatcacagcatgcactgggatgcccagctcaaggcgctggccgggctgtcgccggag
cagccggcgccgcgtgtcgacgaggtgctggcgcgcgtgcacccggatgatcgcgccgag
ctgctggccgccctcggtcgcgcgctgcaaggcaaggacggcggcgaattccagctcgac
taccgcgtgctggacacccggaccgcgcagtttcgctggctgaccaaccgcggccgccga
gtgctggatgccaacggcgaagtgcggattctcggcaccgcgcgcgacatcaccgccgag
cgcaatgccgccgagcacatgctgcgcatgaacgcactgctcgaacagcagatcagcgaa
cgccgcctggccgaacagcgccagaccgcgctgatcgagctgggcgacctgctgcgcgag
cagcacgacagccagaccatcgcccacgccgcggtcagcgtcatcggcggcacgctgggc
gtggcacgggtgctgttcgccagcatcgagcccggcagcctctacgccaccatcgagcgc
tactggagcgacggtgcctcgcgcgacagcagtgagcgggtgcattttcccgacttcggc
gacctctactacgacctgcagaacaatgatctggtggtgatcgacgatgtgctgcacgac
gcgcgcaccgtcgcccagaccgacctgtacagcgaacggcagatccgcagtctggtctgc
gtgccgctgttcgagcagggccagctggccgccgcgctgatgttgctgcatggcgagccg
cgcatctggctcgacgacgacatctcgttcatccgcgaggtcgccgaccgtgcctggaac
gccgacgaacgcatgcgcgccgagcgggcgctgcgcgagagcgaggaacagttccgcacg
ctggccgacaacatcagccagttcgcctggatggccgacccgagcgggcgcatctactgg
tacaacaagcgctggtacgactacaccggcaccaccttcgaggcaatgcgcgcgctcggc
tggcgcgcggtcaaccaccccgaccaccacgagcgggtcagcgcctcgctcaggcgcgcg
ttcgccatcggctcggtctgggaggagaccttcccgctacgcggcaaggacggcatctac
cgctggttcctctcccgcgcgctgccgattcgcgacgatttcggccaggtcacccagtgg
ttcggcaccaataccgacatcaccgcccaggtcgccgccgaggaggccctgcgcgaactc
aacgaaagcctggagcgccgggtcgccgagcgcacccgcgagctggcggcgatcaacagc
cgcctgcatatcgagatggccgagcgcgagcgcgccgaagaggcgctgcgccacgcgcag
aagatggaagccatcggccagctcaccggcggcctggcacacgacttcaacaacatgctc
accggcgtgctcggcgcgctggatctgatccagcggcgggtcaacaacggcagcagcgca
gacctgcaccgctacatcgacgccgcgatgacctccgccaaccgcgccgcggcgctgacc
catcgcctgctcgccttcgcgcgccgccagtcgctcgaccccaagccggtggatgtcaac
cagctggtggtatcgatggaggacatgctgcggcgcaccatcggcgagcacatccgcctg
cacacccagctgcaggcggacgcctggctggcgtataccgatgcccaccagctggaaaac
gccctgctcaacctggtgatcaatgcccgcgacgccatgccgagcggcggcgacctgcag
gtgcgcacccgctgcgtgcagatcgacagcgcccagccgaacggcccggagcccggcgac
tacgtggtgctcagcatcgccgacagcggcgccggaatgtccgcggaggtgatcgccaag
gccttcgatccgttcttcaccaccaagcccatcggccagggcaccggtcttggcctgtcg
atggtctacggcttcgccaagcagaccggcggccacgtgcacatcgacagcacgccgggc
gagggcacgcggatcaccctctacctgccgcgcaaccacagcacgctggaagaatcggcg
aacacgcccgcacccgccgaggtaccgcaggcacagcatggcgagacagtgctggtggtg
gaggacgaagccgccgtacgcatgctggtgatcgaagtgctgcacgagctgggctatgcc
gcactcgaagcctgcgacgcggccagcgccctgccctacctgcagagcgagcagcgcatc
gatctgctggtcagcgacttcggcctgcccggtctcaacggccgccagctcgccgacctc
gcgcgccagcaacggccgcagctgaaggtgctgttcatcaccggctatgcggcggacgcc
acggtgcgcggcgacttcctcgggccgggcatggacatgctggccaagccgttcagcatc
gatgccctcggccagcgcattcgtcagctgatcgagcgcgacggctag
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