KEGG   Pseudomonas phenolilytica: HU825_06845
Entry
HU825_06845       CDS       T08532                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pphn  Pseudomonas phenolilytica
Pathway
pphn03030  DNA replication
pphn03430  Mismatch repair
pphn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pphn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HU825_06845
   03430 Mismatch repair
    HU825_06845
   03440 Homologous recombination
    HU825_06845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pphn03032]
    HU825_06845
   03400 DNA repair and recombination proteins [BR:pphn03400]
    HU825_06845
Enzymes [BR:pphn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HU825_06845
DNA replication proteins [BR:pphn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HU825_06845
DNA repair and recombination proteins [BR:pphn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HU825_06845
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNApol3-delta_C
Other DBs
NCBI-ProteinID: UIP86268
LinkDB
Position
complement(1448466..1449173)
AA seq 235 aa
MKMTWFHPRGPKLTLDQQQRLAKLKRPAALDGTPLREQRMVVLDLETTGLHLKRDLVISI
GAVTIENAAIDFSQQFECTLNRQIKFSESVLIHGIAPSELASGLPPADALLSFMEFAGDS
VILAFHAPFDERMLGRALKKELGYTLQNTFLDVADLAPMLFPHAMIHRGGLDHWLQYFHI
DIPQRHHASADALATAQIALILMSRARRLGIERIDELAQRVRCWKRSQQVARHSL
NT seq 708 nt   +upstreamnt  +downstreamnt
atgaagatgacctggttccacccgcgcgggccgaagctcacgctcgatcagcagcaacgc
ctggccaaactgaagcgccccgccgcgctggacggaaccccgctgcgcgaacagcgcatg
gtggtactcgacctcgaaaccaccggcctgcatctcaagcgcgacctggtcatttccatc
ggcgcggtgaccatcgaaaacgcggcgatcgatttctcccagcagttcgagtgcacactc
aaccgtcagatcaagttcagcgaaagtgtgctgattcacggcatcgcgcccagcgagctg
gccagcggcctgccaccggccgacgcgctgctcagcttcatggaattcgccggtgatagc
gtgatccttgcattccacgcaccgttcgatgagcgcatgctgggtcgtgcgctaaagaaa
gagctgggctacaccctgcagaacacctttctcgacgtggccgaccttgcgccgatgctg
ttcccgcacgccatgattcaccgcggcggactcgaccactggctgcagtacttccatatc
gacattccgcagcgccaccatgcctccgccgatgcgctggccacggcgcagatcgccttg
atcctgatgagccgcgcccgccgcctgggcatcgaacgcatcgatgagctggctcagcgc
gtccgctgctggaagcgctcgcagcaggtcgcgcgacactcgctctga

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