Pseudomonas phenolilytica: HU825_09170 Help Entry HU825_09170       CDS       T08532                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism pphn  Pseudomonas phenolilytica Pathway pphn02020   Two-component system pphn02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pphn00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HU825_09170  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HU825_09170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pphn03021]     HU825_09170 Transcription machinery [BR:pphn03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HU825_09170 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Acyl-CoA_dh_C DUF4741 HTH_IclR RRP4_S1 Motif Other DBs NCBI-ProteinID:  UIP86705 LinkDB All DBs Position complement(1919252..1920757) Genome browser AA seq 501 aa AA seqDB search MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPMLEREEDGDDFSHAD PMAEAADQNGEGSSASQTSSDNRYEEPAHNADHLEEGDWGERIPSELPVDTAWEDIYQTS ASSLPSSDDDDWDFTTRTSSGVSLQSHLLWQLNLAPMSDTDRLIATTLIDCINDQGYLEE SLEEVLESLDPELEVELDEIEVVLHRIQQFEPAGIGARNLSECLLLQLRQLPEQTAWLEQ AKQLVSDYLDVLGNRDYSLLMRRMKLKEDELRQVIELVQSLNPRPGSQIEASEPEYVVPD VIVRKHNDRWLVELNQDAMPRLRVNAQYAGFVKRADSSADNTFMRNQLQEARWFIKSLLS RNETLMKVATQIVEHQRGFLEHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRG IYELKYFFSSHVSTAEGGECSSTAIRAIIKKLVAAENPKKPLSDSKIAGLLEAQGIQVAR RTIAKYRESLGIAPSSERKRL NT seq 1506 nt NT seq  +upstreamnt  +downstreamnt atgaaaccatcgctagtcctgaagatgggccagcagctgacgatgacgccgcagctgcaa caagccatacgactgctgcagctttctacgctggatctgcagcaggaaatccaggaagcc ctggattccaacccgatgctcgagcgcgaggaggacggcgatgacttcagccacgccgat cccatggccgaagccgccgaccagaacggcgaaggctcctctgccagccagacaagcagc gacaatcgttacgaagaacccgcacataacgccgaccacctggaagaaggcgactggggc gagcgcattcctagcgaactgcccgtcgacacggcctgggaagacatctaccagaccagc gccagcagcctgccgagcagtgacgatgacgattgggatttcaccacccgcacctcaagc ggcgtcagcctgcaaagccacctgctctggcaactcaacctggcgccaatgagcgatacc gaccgcctgatcgccacgaccctcatcgactgcatcaatgaccaaggctatctggaagaa agcctggaagaggtgctcgagtcgctggaccccgagctcgaggtcgaactcgacgagatt gaagtggtgctccaccgtatccagcagttcgaacccgccggcatcggcgcccgcaacctg agcgaatgcctgctgctgcaactgcgccagctgcccgaacagaccgcctggctggagcag gccaagcaactggtgagcgattacctggatgttctgggtaatcgcgactacagcctgctg atgcgcaggatgaagctcaaggaagatgagctacgccaggtgatcgagctggtacagagc ctcaacccgcgccccggctcgcaaatcgaggccagcgagccagaatatgtggtgccagat gtgattgtgcgcaagcacaacgatcgctggctggtggagttgaaccaggacgccatgccg cgcctgcgggtcaacgcgcaatacgccggcttcgtcaagcgcgccgactccagcgccgac aacaccttcatgcgcaaccagctgcaggaagcgcgctggttcatcaagagcctgctgagc cgcaacgagacgctgatgaaggtcgccacgcagatcgtcgagcatcagcgtggctttctc gaacacggcgacgaagcgatgaagccccttgtgctacacgacatcgccgaggcggtaggc atgcacgaatcgaccatctcgcgcgtgaccacgcagaaatacatgcacacgccacggggt atttatgagctgaaatacttcttctccagccacgtcagtacggccgaaggcggcgagtgc tcctccaccgctatccgcgcgatcatcaagaagttggtcgctgcggaaaaccccaaaaag ccattgagcgacagtaagatcgctggtttactggaggcacagggcatccaggttgcccgt cgtaccatcgccaaataccgtgaatcgcttggtatcgctccctcaagcgagcgcaagcgg ctatag

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