Pseudomonas phenolilytica: HU825_10505
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Entry
HU825_10505 CDS
T08532
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pphn
Pseudomonas phenolilytica
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphn03021
]
HU825_10505 (rapA)
Transcription machinery [BR:
pphn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU825_10505 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Ddi2_HDD
Motif
Other DBs
NCBI-ProteinID:
UIP86961
LinkDB
All DBs
Position
complement(2170962..2173811)
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYLPGQRWISDSEAELGLGTILTHDGRMLTVLYPATGETRQYATRSAPLTRVRFAPG
DEITHFEGWKMTVREVDDVDGLLVYHGFTAQNEARTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLQHQSTQLQSSLWGLGGVRAQPIAHQLHIAKEVADRIAPRVLLADEVG
LGKTIEAGLIIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDDERFIESDA
SNPFEDAQLALVSLEWLKDDERAQDAAFAAGWDLLVVDEAHHLVWHPDGASAEYQLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRAESSSYQPVAQAVQELLDD
GRLSQEAHETIHTFLGAEGEALLAAATDGDIEASSRLIRELLDRHGTGRLLFRNTRAAVQ
GFPERQLHPYPLPCPAEYMELPLGEHAELYPEVAFQSQQDDGEAGTRWWQFDPRVEWLID
TLKMLKKYKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQQHVIQLHVPYLETS
PQQRLFQWYHEALNAFLATCPTGNALQHQFGPRLLTQLEEGDDEAFQRLIDEARAERERL
EAELHTGRDRLLELNSGGGEQGKALVEAIEEQDDQFALPIYMEQLFDAFGIDSEDHSENA
LVLRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLFVSEVVAPRALQLSRFLPPLALRCLLDGNGNDLATKVA
FDTLNDQLESVPRNSANKFVQAQRDVLATQIAAAEAKVAPRHTERVAEAQRKLKAGLDEE
LARLVALQAVNPSVRDSEIEALRQQREEGLAALEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatctaccggggcaacgctggatcagcgacagcgaagccgagctcggg
ctgggaaccatcctgacccacgacgggcgaatgctcaccgtgctctatcccgccaccggc
gaaacccgccagtacgccacgcgcagcgcaccgctgacgcgcgtgcgcttcgccccgggc
gacgagattacccatttcgaaggctggaagatgaccgtgcgtgaggtcgacgacgtcgac
ggcctgctggtctatcacggcttcaccgcacagaacgaagcccgcaccctgccggaaacc
cagctgtcgaatttcatccagttccgcctggccagcgaccgcctgttcgccggccagatc
gatccgctggcctggttcagcctgcgctatcacactctgcagcatcaaagcacccagctg
cagtcgtcgctgtggggcctgggcggcgtgcgtgcgcaacccatcgcgcaccagctgcac
atcgccaaggaagtcgccgaccgcattgccccgcgcgtgctgttggcggatgaagtgggc
ctgggcaagaccatcgaggccggcctgatcatccatcgccagctgctctccggtcgcgcc
agccgcgtgctgatcctggtgccggagaaccttcagcaccagtggctggtggagatgcgc
cggcgcttcaacctggaggtcgcgctgttcgacgacgagcgcttcatcgagagcgacgcc
agcaacccgttcgaggacgcccagctcgcgctggtctcgctggaatggctgaaggacgac
gaacgcgcccaggatgccgccttcgccgccggctgggacctgctggtggtcgacgaggcg
catcacctggtctggcatccggacggtgccagcgccgagtaccagctggtcgaacagctg
gccgaggtgatccccggcgtgctgctgctcaccgcgacccccgaacagctcggtcaggac
agccacttcgcgcgcctgcgcctgctcgaccccaaccgtttccatgacttggaggccttc
cgcgccgaaagcagcagctaccagccggtcgcccaggccgtacaggaactgctcgatgac
ggtcgcctgtcgcaggaagctcacgagaccattcacaccttcctcggcgccgaaggtgag
gctctgctcgccgccgccaccgatggcgacatcgaggccagcagccggctgatccgcgag
ctgctcgaccgtcacggcaccggccgcctgctgttccgcaatacccgcgccgccgtgcag
ggcttcccggagcgccagctgcacccctacccgctgccctgcccggccgaatatatggaa
ctgccgctgggtgaacatgccgagctgtacccggaggtggccttccagagccagcaggac
gatggcgaggccggcacgcgctggtggcagttcgacccgcgcgtcgaatggctgatcgac
accctgaagatgctgaagaagtacaaggtgctggtgatctgcgcccacgccgaaaccgcg
ctggacctggaagacgcgctgcgcgtgcgctccggcattcccgccacggtgttccacgag
ggcatgagcatcctcgaacgcgaccgcgccgcggcctacttcgccgacgaggagttcggc
gcgcaggtgctgatctgctccgagatcggctcggagggtcgcaacttccagttcgcccat
catctggtgctgttcgacctgccggcgcacccggatctgctcgaacagcgcatcggccgt
ctcgaccgtatcggccagcagcacgtcatccagttgcacgttccctatctggaaaccagc
ccgcagcagcgcctgttccagtggtatcacgaggcgctgaacgccttcctggccacctgc
ccgaccggcaacgccctgcagcaccagttcggcccgcgcctgctgacacagctggaagaa
ggcgacgacgaggcgttccagcgcctgatcgacgaggcccgcgccgagcgcgagcgcctc
gaagccgaactgcacaccggtcgtgaccgcctgctggaactcaactccggcggcggcgaa
cagggcaaggcgctggtcgaagccatcgaggaacaggacgaccagttcgccctgccgatc
tacatggagcagctgttcgacgccttcggcatcgacagcgaagaccactccgagaacgcc
ctggtgctgcgccccagcgagaagatgctggatgccagcttcccgctcggcgacgacgag
gcggtcaccatcacctacgaccgcgagcaggccctggcccgcgaggacatgcagttcctg
acctgggaacatcccatggtgcagggcggcatggatctggtgctgtccggttcgatgggc
aacaccgcggtggcgctgatcaagaacaaggcgctcaagcccggcaccgtcctgctcgaa
ctgctgttcgtcagcgaagtggtggcgccgcgcgcgctgcagctgagccgcttcctgccg
ccgctggcgctgcgctgcctgctcgacggtaacggcaacgatctggcgaccaaggtggcg
ttcgatacgctcaacgatcagctggaaagcgtgccgcgcaacagcgccaacaagttcgtc
caggcccagcgcgacgtgctcgccacgcagatcgctgccgccgaagccaaggtcgcgccg
cgccacaccgaacgcgtcgccgaggcgcagcgcaagctcaaggccggactggacgaagag
cttgcccgcctggtcgcgttgcaggcggtcaacccgagcgtgcgcgacagcgagatcgaa
gcgctgcgccagcagcgcgaagaaggcctggccgcgctggagaaagccgcgctgcgcctg
gaggcgatccgggtcctggtggccggctga
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