Pseudomonas phenolilytica: HU825_10575
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Entry
HU825_10575 CDS
T08532
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pphn
Pseudomonas phenolilytica
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphn03016
]
HU825_10575
Enzymes [BR:
pphn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HU825_10575
Transfer RNA biogenesis [BR:
pphn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HU825_10575
Prokaryotic type
HU825_10575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UIP86975
LinkDB
All DBs
Position
complement(2190754..2191719)
Genome browser
AA seq
321 aa
AA seq
DB search
MDLVFLGTSSGTPTRARNVTGLALQEDAGKAWYLIDCGEGTQHRLLRMPLSLHDLRAIFI
THVHGDHCYGLPGLLASAGMMGRRHPLEIIAPAGIADWLQATLRMSHAWLGYELAFHAVE
SLGEWRSLNMRVAATALSHRVPCYGYSFTEARPDPRLNIERLERDGVPRGPLWGQLARGF
DLEHEGRTLRSEDYLSFTRAPRRVVIGGDNDRPPLLAEACRGAQVLVHEATYSQTLVETS
GNTFGHSSAAQVAAFAQQAEVPNLVLTHFSARYQPGSQRGHSIEEIRQEAATAYHGQLFL
ARDFLRLRLGKDGVLHEVEPT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtggatctggtctttctcggcacctcctccggcacgcccacccgggcgcgcaacgtcacc
ggcctggccctgcaggaggacgccggcaaggcctggtacctgatcgactgcggcgaaggc
acgcagcaccgcctgctgcgcatgccgctgtcgctgcacgacctgcgcgcgatcttcatc
acccatgtccatggcgaccattgctacggcctgcccggcctgctcgccagcgccggcatg
atgggccgccggcatccgctggagatcatcgccccggcgggtatcgccgactggctgcag
gcgacgctgcgcatgagccacgcctggctgggctatgagctggccttccatgccgtcgaa
agcctcggcgagtggcgcagcctgaacatgcgcgtcgcggcaaccgcgctgtcccatcgc
gtgccctgctacggctacagcttcaccgaggcgcgcccggacccgcgcttgaacatcgag
cggctggagcgcgacggcgttccgcgcggcccgctctgggggcagctggcacgcggcttc
gacctcgaacatgaaggtcgaacgctgcgcagtgaggactacctgagcttcacccgcgcg
ccgcggcgcgtcgtcattggcggcgacaacgaccgtccgccgctgcttgccgaggcctgc
cgcggcgctcaggtgctggtgcacgaagcgacgtatagccagacgctggtcgaaaccagc
ggcaataccttcggccacagcagcgccgctcaggtagcggccttcgcgcagcaggccgag
gtgccgaacctggtgctgacgcacttcagcgcgcgctaccagcccggctcgcagcgcgga
cattccatcgaggagatccgccaggaagcggccacggcgtatcacggccagctgtttctg
gcgcgggacttcctgcggctgcgcctgggcaaggacggcgtcctgcacgaggtggagccg
acctga
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integrated database retrieval system
