Pseudomonas phenolilytica: HU825_11275
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Entry
HU825_11275 CDS
T08532
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pphn
Pseudomonas phenolilytica
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphn03009
]
HU825_11275 (der)
Ribosome biogenesis [BR:
pphn03009
]
Prokaryotic type
GTPases
HU825_11275 (der)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
SRPRB
Ras
AAA_22
cobW
DUF5906
ABC_tran
AAA_28
NTPase_1
AAA_24
AAA_18
TniB
ATP_bind_1
NOG1
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
UIP87108
LinkDB
All DBs
Position
2330415..2331899
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AA seq
494 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI
SGDEEGIDAKMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIAEHLRKRNKRSFLVANKV
DTVDPDLARAEFSPLGLGDALPIAAAHGRGISHMLDAALGIFPKDNAEEGETVENEVAEE
VAQGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP
FERDGEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN
LLGFVLETGRALVIALNKWDGMEQGEKDYVKTELERRLFFVDFADIHFISAKHGTGVGHL
YKSVQASFTSAVTRWPTSRLTQILEDAVREHQPPMVAGRRIKLRYAHLGGANPPLIVIHG
NQVDAVPKSYSRYLENTYRRVLKLVGTPIRIEYKGGENPYEGKKNTLTDRQVNKKRRLMS
HHKKAEKKRRDKKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatagctctggtggggcgcccgaacgtcggcaaatccaccctgttcaat
cggctcaccaagagccgcgacgccattgtcgccgagtacgccggcctgacccgcgatcgc
cagtatggcgaggccaaatggcaggggcgcacctacatcgtgatcgacaccgggggcatt
tccggtgatgaggaaggcatcgacgcgaagatggccgaacagtcgttgcaggcgatcgag
gaggccgatgcggtgctgttcatggtcgactcgcgcgcggggctgactgccgccgaccag
atgattgccgagcacctgcgcaagcggaacaagcgcagcttcctggtggcgaacaaggtc
gataccgtcgatcctgatctcgcgcgagccgagttcagtccgctggggctgggcgatgcg
ctgcctatcgcggcggcgcacggtcgtggcatcagccacatgctggatgcggcgctgggt
atcttccccaaggacaacgccgaagagggcgagacggtcgaaaacgaggttgccgaggaa
gttgcgcaggggcaggaggctaagcgcatccccgggcctagcgagaaggatggcatcaag
atcgctatcatcggccggcctaacgttggtaagtccacgctggtcaaccgcatgctcggc
gaagagcgggtcatcgtttacgaccaggctggcacaacgcgcgacagtatctacattccg
ttcgaacgcgatggcgagaagtacacgctgatcgataccgccggcgtgcgtcggcgcggc
aagatcttcgaggcagtggagaagttctccgtagtcaagacactgcaggcgatccaggac
gccaacgtggtgatcttcgtcatggatgcccgtgagggcgtcgtcgagcacgatctcaac
ctgctcggcttcgtgctggaaaccggtcgtgcgctggtcatcgcgctgaacaagtgggat
ggcatggagcagggcgaaaaggactacgtgaagaccgagctggagcgccggttgtttttc
gtcgacttcgccgatatccatttcatctcggccaagcacggcaccggggtcgggcacctg
tacaagtcggtgcaggcgtcgttcacctcggctgtcactcgctggccaaccagccgcctg
acgcagatcctcgaggacgcggtgcgcgagcaccagccgccgatggtcgccgggcgccgc
atcaagctgcgctatgcgcacctgggcggcgccaacccgccgctgatcgtgatccacggc
aatcaggtcgatgcggtgccgaagtcctactcgcgttatctggagaacacctaccgacgc
gttctgaagctggtcggcacgccgatccgcatcgagtacaagggcggtgagaacccgtac
gagggcaagaagaacaccctcaccgatcgccaggtcaacaagaaacgccgcttgatgagc
catcacaagaaggccgagaagaagcgtcgcgacaagaagcgctag
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