Pseudomonas phenolilytica: HU825_11675
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Entry
HU825_11675 CDS
T08532
Name
(GenBank) retention module-containing protein
Organism
pphn
Pseudomonas phenolilytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
UIP87179
LinkDB
All DBs
Position
2422187..2429650
Genome browser
AA seq
2487 aa
AA seq
DB search
MAKLIGTVRQVVGEAFAVGEDGVRRLLIEGDRLYAGERVITSAGGAVDIDLVGAGELMLG
RESDLLLDEQLLVAAEGGTQAAPPITSATELADVEALQRAIAAGEDPTLVAPATAAGPAA
GGAGGAGGGNSFVLLNEVGGAIDPTIGFPTRGLGGIPEFPDLEVAPLEETPEPVDGVPLA
VDDLTQISEDTPSIAGNVLSNDQPGSDGGIRVVSVGTVAGTFGQLVLNADGTYSYALNSS
LPAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDEAGL
SSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTVTAY
NAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVADSA
SVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTAAHGTFTDLGGGNYSYLINP
ADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDEAG
LSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTVTA
YNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVADS
ASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYSYLIN
PADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDEA
GLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTVT
AYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVAD
SASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYSYLI
NPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDE
AGLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTV
TAYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVA
DSASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYSYL
INPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVD
EAGLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLT
VTAYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAV
ADSASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYSY
LINPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLV
DEAGLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTL
TVTAYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHA
VADSASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYS
YLINPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSVVGANVS
ELGLPSGSDATGYSEFATGTFTFGDVDGLDDIQTVTIGGTAVNIANLIGSSFAGAYGVLN
ILGYNDETGVVSYQYQLTSPTTDVDGVTEADTFTISVSDGAASTSSDLVIGIADDLPSLG
AFVAATIPNEVGTVNGTFAVVPGADGLGGFEITGPTLDGVTYQTTQNFSGGMFVSTTLTA
LTDTNQQVFTLTVSADGTYSFQLIAPEAGYTEAIDFTSLEPGKPISVASSIENGWTFDGL
LFSGTSPTTFTNPDSGSGSNSDLLNISGNGFGLGSASSVPDNAGFLYTQQGGADSLRFFA
DISSSLEGKGTVQISWAAYGSTVGGTPLAVSTQSITLTADGWVTIDPGVSFENLVVRVDV
IGANTGGIRVQDFSYSREVLPDDQSLSFGIVAQDGDGDLSAPSTLDVQITAADSSDAFTL
IGTAGDDVIAASSLTDSISGNTGFDIVDYGDATTAIAASLLSGTGTLGDALGDSYTGIEG
LAGGTGDDVLTGNTLDNYLAGGAGSDTLVGGEGDDVLDGGIGADILQGGIGDDVLIGGAG
TDALEGGSGMDIADYSADGVGITVDLESGAPGIGGLAAGDTYLDMEGVIGGSGDDLLAGD
TQDNYLDGGLGDDVLSGGGGDDVLIGGLGDDSMTGGAGRDTFVWRAGDNGSDTISDFHID
PAGVTSDVLDLSELLSGVDADSATLDNYLTFAFGNDTVISVSVTPGGAPVQDITLAGVDL
ADLYGTTNEAAVIDSLLADNALKVDNT
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttgatcggtaccgtcaggcaggttgtgggtgaggctttcgcggtcggtgag
gacggcgtacgccggttgcttatcgagggcgatcgtctgtatgccggcgagcgggtgata
accagcgcaggcggggcggtggatatcgacctggtcggagcgggcgaactcatgctgggg
cgcgaatccgacctgctgctcgacgagcaattgctggtcgctgccgagggcggtacccag
gcggcaccaccgatcacatcggcgaccgagctggccgacgtcgaggctctgcagcgcgcc
atcgcggccggtgaagacccgaccctggtcgctccagccacggccgcgggtccggcagct
ggtggcgcgggtggcgccggtggtggtaattccttcgtgctgttgaatgaagtcggtggg
gctatcgatcccactatcggtttcccgacccggggcctgggcggtatcccggagtttccc
gatctggaagtggcaccgctcgaggaaacgcccgagccggtagatggcgttcccctggct
gtcgatgacctgacgcagatcagcgaggacacaccgagcatcgcaggcaatgtgctgagc
aacgaccaaccgggcagcgatggcggtatccgcgtcgtttcggtcggtaccgtcgccggc
accttcggtcagctggttctcaatgccgacggtacctacagctatgcgcttaacagcagc
ctgccggccgtacagggcctggacgagggcgaaaccctcaccgaaaccttcacctacacc
atgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcaccatcaccggcagc
aacgatggcccgaccctgagccttgtcgccaccgacagcctcgtcgacgaagccggtctg
agcagcggttcggcggcggctggcgacggcgagttcgcctccggcagcttcaccctggcc
gacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagaccgtggcgatt
ggtgacctgcagggcgaaaccttcgccggcgaccacggcaccctgacggtcaccgcctac
aacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgaccaccgacggc
gccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggcagctcgacc
ccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtggccgacagcgcc
agcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaacgacctgcac
gccaacggccagccgggcgccgacaccccgaccagcttcgtcaactggaccagcaccacg
gcggcgcacggcaccttcaccgacctgggcggcggcaactacagctacctgatcaacccg
gccgatgccgcggtgcagggcctggacgaaggtgaaaccctcaccgagaccttcacctac
accatgcaggacgccgacggtgatccgtccagcgcaacgctgaccatcaccatcaccggc
agcaacgacggcccgaccctgagccttgtcgccaccgacagcctcgtcgacgaagccggt
ctgagcagcggttcggcggcggctggcgacggcgagttcgcctccggcagcttcaccctg
gccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagaccgtggcc
attggtgacctgcagggcgaaaccttcgccggcgaccacggcaccctgacggtcactgcc
tacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgaccaccgac
ggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggcagctcg
accccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtggccgacagc
gccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaacgacctg
cacgccaacggccagccgggtgccgacaccccgaccagcttcgtcaactggaccagcacc
acggcgacgcacggcaccttcaccgacctgggcggtggcaactacagctacctgatcaac
ccggccgatgccgcggtgcagggcctggacgagggcgaaaccctcaccgagaccttcacc
tacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcaccatcacc
ggcagcaacgatggcccgaccctgagccttgtcgccaccgacagcctcgtcgacgaagcc
ggcctgagcagcggctcggcggcggccggcgacggtgagttcgcctccggcagcttcacc
ctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagaccgtg
gccattggtgacctgcagggcgagaccttcgccggcgaccacggcaccctgacggtcact
gcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgaccacc
gacggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggcagc
tcgaccccggccagcctggtcatcgaaattgtcgacgacgtcccgcacgccgtggccgac
agcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaacgac
ctgcacgccaacggccagccgggcgccgacaccccgaccagcttcgtcaactggaccagc
accacggcgacgcacggcaccttcaccgacctgggcggcggcaactacagctacctgatc
aacccggccgatgccgcggtgcagggcctggacgagggcgaaaccctcaccgagaccttc
acctacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcaccatc
accggcagcaacgacggcccgaccctgagcctcgtcgccaccgacagcctcgtcgacgaa
gccggcctgagcagcggctcggccgcggccggcgacggcgagttcgcctccggcagcttc
accctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagacc
gtggccattggtgacctgcagggcgagaccttcgccggcgaccacggcaccctgacggtc
actgcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgacc
accgacggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggc
agctcgaccccggccagcctggtcatcgaaattgtcgacgacgtcccgcacgccgtggcc
gacagcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaac
gacctgcacgccaacggccagccgggcgccgacactccgaccagcttcgtcaactggacc
agcaccacggcgacgcacggcaccttcaccgacctgggcggcggcaactacagctacctg
atcaacccggccgatgccgcggtgcagggcctggacgagggcgaaaccctcaccgagacc
ttcacctacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcacc
atcaccggcagcaacgacggcccgaccctgagcctcgtcgccaccgacagcctcgtcgac
gaagccggcctgagcagcggctcggccgcggccggcgacggcgagttcgcctccggcagc
ttcaccctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaag
accgtggccattggtgacctgcagggcgagaccttcgccggcgaccacggcaccctgacg
gtcactgcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcg
accaccgacggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcacc
ggcagctcgaccccggccagcctggtcatcgaaattgtcgacgacgtcccgcacgccgtg
gccgacagcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgacc
aacgacctgcacgccaacggccagccgggcgccgacaccccgaccagcttcgtcaactgg
accagcaccacggcgacgcacggcaccttcaccgacctgggcggcggcaactacagctac
ctgatcaacccggccgatgccgcggtgcagggcctggacgagggcgaaaccctcaccgag
accttcacctacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatc
accatcaccggcagcaacgacggcccgaccctgagcctcgtcgccaccgacagcctcgtc
gacgaagccggcctgagcagcggctcggccgcggccggcgacggcgagttcgcctccggc
agcttcaccctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggc
aagaccgtggccattggtgacctgcagggcgagaccttcgccggcgaccacggcaccctg
acggtcactgcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaa
gcgaccaccgacggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggc
accggcagctcgaccccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgcc
gtggccgacagcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctg
accaacgacctgcacgccaacggccagccgggcgccgacaccccgaccagcttcgtcaac
tggaccagcaccacggcgacgcacggcaccttcaccgacctgggcggcggcaactacagc
tacctgatcaacccggccgatgccgcggtgcagggcctggacgagggcgaaaccctcacc
gagaccttcacctacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgacc
atcaccatcaccggcagcaacgacggcccgaccctgagcgtcgtgggggccaacgtctcc
gagctcggcttgccgtccggctcggatgccacgggctacagcgaatttgccacgggtacc
ttcacgtttggcgatgtggatggcctggacgacatccagaccgtcacgatcggcggtacc
gcggtgaatattgccaatctgatcggcagtagttttgccggcgcgtacggtgtgctgaac
atcctcggctacaacgacgagacgggtgtggtcagctatcagtaccagttgaccagtccg
acgaccgatgtggatggcgtgacggaggccgataccttcacgatcagcgtgtcggatggc
gcggccagtacgtcgagcgatctggttatcggtatcgccgatgatctgccgtcgcttggt
gcttttgtcgccgcgacgattcccaacgaagtcggcacggtcaacggcacctttgcggta
gtaccgggggcagatgggctgggcggcttcgagatcaccgggccgacgctggacggcgtg
acctatcagaccacgcagaatttcagtggtggcatgttcgtcagcaccacgctcacggcg
ctgacggacaccaaccaacaggtctttaccttgacggtgagcgcagacggcacctacagc
ttccagctgatcgcgccggaggcgggttacaccgaggccatcgactttacgagcctggaa
cctggcaagccgatttccgtggcgtccagcatcgagaatggttggacgttcgacggcctg
ctgttcagcggaacctccccaacgacatttaccaaccccgatagcggcagcggctccaat
agcgatctgctcaacatctcgggaaatgggttcggcttggggagtgcgagctccgttccg
gacaacgccggtttcctctacacccagcagggcggcgcggatagcttgcgtttcttcgcc
gatatttcatcgagcctggaaggaaagggcactgtacagatttcctgggctgcctatggc
agcaccgtcggcggtacgccgctggccgtcagcacgcagagcataacgctgactgcagat
ggctgggtcaccatcgacccgggcgtctcgttcgagaatctggtggtacgtgtcgacgtg
atcggcgcgaacactggcgggatccgggtgcaggatttctcttattcccgtgaagtgctg
ccggacgaccagagtctgtccttcggcatcgtggcgcaggacggtgatggcgacctgagt
gcgccgtctaccctcgatgtacagattacggcggccgactcgtcagatgccttcaccttg
atcggaacggcaggcgacgatgtcatcgccgccagcagcctgaccgacagcatcagcggc
aacaccggcttcgatatcgtcgactacggcgacgcgaccacggccattgcggccagcctg
ctcagcgggacgggcacgctgggggacgcactcggtgatagctacacgggcatcgaaggc
ctggccggcgggacgggcgacgacgtgctgaccggcaatacgctggacaactacctggcc
ggcggcgctggcagcgatacgctggtgggcggtgagggcgacgatgttctcgacggcggg
atcggagccgacattctgcagggcggtatcggcgatgacgtgctgatcggcggggcagga
acggacgcgctggaaggtggctccggcatggacatcgccgattacagcgccgacggcgtc
ggcatcacggtcgatctggagagcggcgcaccgggtattggcggcctggctgcgggtgat
acctacctcgacatggagggcgtgataggcggcagcggcgacgatctgctggctggcgac
acgcaggacaactatctggacggcgggctgggcgacgacgtcctctccggtggtggtggc
gacgacgtcctgatcggcgggttgggtgacgacagcatgaccggcggcgccggccgtgac
accttcgtctggcgggcgggtgacaatggcagcgataccatcagcgacttccatatcgac
ccggccggtgtcacctcggacgtgctcgatctgtcggagctgctatccggagtggatgcc
gacagcgctacgctggacaattacctgacgttcgccttcggcaacgacacggtcatttcg
gtcagcgttacgccgggcggtgcgccggtgcaggacattaccctggccggtgtggatctg
gcagatctgtacggcaccaccaacgaggcggcggtgatcgatagcctgcttgccgacaac
gccctgaaggtcgacaacacctga
DBGET
integrated database retrieval system
