Pseudomonas phenolilytica: HU825_12965
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Entry
HU825_12965 CDS
T08532
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn00071
Fatty acid degradation
pphn00280
Valine, leucine and isoleucine degradation
pphn00310
Lysine degradation
pphn00362
Benzoate degradation
pphn00380
Tryptophan metabolism
pphn00410
beta-Alanine metabolism
pphn00640
Propanoate metabolism
pphn00650
Butanoate metabolism
pphn00907
Pinene, camphor and geraniol degradation
pphn00930
Caprolactam degradation
pphn01100
Metabolic pathways
pphn01110
Biosynthesis of secondary metabolites
pphn01120
Microbial metabolism in diverse environments
pphn01200
Carbon metabolism
pphn01212
Fatty acid metabolism
Module
pphn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU825_12965 (fadB)
00650 Butanoate metabolism
HU825_12965 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU825_12965 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU825_12965 (fadB)
00310 Lysine degradation
HU825_12965 (fadB)
00380 Tryptophan metabolism
HU825_12965 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU825_12965 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU825_12965 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU825_12965 (fadB)
00930 Caprolactam degradation
HU825_12965 (fadB)
Enzymes [BR:
pphn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU825_12965 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU825_12965 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU825_12965 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU825_12965 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UIP87405
LinkDB
All DBs
Position
2691703..2693850
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDALKADASVKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLGVPTVVAINGIALGGGFE
MCMSADYRVMSSAAKVGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENGAEDAL
KVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKLKLNAIEQMMAFETTKAF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLSDQEL
KKKAKAYDKQARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEGIQMGLDEASKL
LGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVENPKVKHAVLAEVEGHVR
EDVIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSETAIATTVA
YAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRADKVMEKFGWPMGPAYL
MDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQKNGKGFYAYEMDKKGKP
KKVVDPQAYELLKPIVAETRELSDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVAMADKYADLGPLYHPTAKLREMAANGQRFYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaataaattcaatcgcctcactctcaacgaactc
cgtcaggcggtcgacgccctcaaggccgatgcatcggtcaagggcgtgatcgtcaccagc
ggcaaggacgtattcatcgtcggtgccgatatcaccgagttcgtcgacaacttcaagctg
cccgacgaggagctggtcgccggcaacctcgaagccaacaagatcttcagcgatttcgag
gacctgggcgtgcccaccgtggttgccatcaacggcatcgccttgggtggcggtttcgag
atgtgcatgtctgccgattaccgcgtcatgtccagcgccgccaaggttggcctgccggaa
gtgaagctgggcatctacccgggcttcggcggtaccgtccgcctgccgcgcctgatcggt
gtcgataacgccgtcgagtggatcgcgtcaggcaaggaaaacggtgccgaagacgcgctc
aaggtgcacgcggtcgatgccgtcgtcgctccggaaaagctgcaggaagcggcactggat
ctggtcaagcgcgccatctccggtgagctggattacaaggccaagcgccagccgaagctg
gacaagctcaagctcaacgcgatcgagcagatgatggcgttcgagaccaccaaggccttc
gtggccggccaggccggcccgaactacccggcgccggtcgaagccatcaagagcatccag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggccgccggcttcgtcaaa
ctggccaagacttcggttgccgaaagcctgatcggcctgttcctcagcgatcaggagctg
aagaagaaggccaaggcttacgacaagcaggcgcgcgacgtgaaactggctgccgtgctg
ggcgccggcatcatgggtggcggcatcgcctaccagtcggccgtcaagggcacgccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggtctggacgaggcctccaagctg
ctcggcaagcgtgtcgagaagggccgtctgactccggagaagatggcgcaggcgctcaac
gcgatccgcccgaccatgtcctacggcgatttcggcaacgtcgacatcgttgtcgaggcc
gtggtcgagaacccgaaggtcaagcacgccgtgctggccgaggtggaaggccacgtgcgc
gaagacgtgatcatcgcctccaacacctccaccatctccatcagctatctggcccaggcg
ctcaagcgtccggaaaacttctgcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagaccagcgaaaccgccatcgccaccaccgtcgcc
tacgccaagaagatgggcaagagcccggtcgtggtcaacgattgcccgggcttcctggtc
aaccgcgtgctgttcccatacttcggcggcttcgctcgcgccatcgcccacggtgtcgac
ttcgttcgcgccgacaaggtgatggagaagttcggctggcccatgggcccggcttatctg
atggatgtcgtcggcatggacaccggccaccacggccgtgacgtgatggccgaaggtttc
ccggatcgcatgaaggacgacacccgcacggctgtcgacgtcatgtacgacgccaaccgc
ctcggccagaagaacggcaagggcttctacgcctacgagatggacaagaagggcaagccg
aagaaggtcgtcgacccgcaggcctacgagctgctcaagccgatcgttgccgagactcgc
gagctgtccgacgaggacatcatcaactacatgatgatcccgctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtcgagaccgctgccgaagccgacatgggcctgatctat
ggcatcggcttcccacccttccgtggtggtgcgctgcgctacatcgattcgatcggcgtc
gccgagttcgttgcgatggccgacaagtacgccgacctgggcccgctgtaccacccgacc
gcgaagctgcgtgagatggctgccaacggccagcgcttctacggttaa
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