Pseudomonas phenolilytica: HU825_13105
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Entry
HU825_13105 CDS
T08532
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn00260
Glycine, serine and threonine metabolism
pphn00460
Cyanoamino acid metabolism
pphn00630
Glyoxylate and dicarboxylate metabolism
pphn00670
One carbon pool by folate
pphn00680
Methane metabolism
pphn01100
Metabolic pathways
pphn01110
Biosynthesis of secondary metabolites
pphn01120
Microbial metabolism in diverse environments
pphn01200
Carbon metabolism
pphn01230
Biosynthesis of amino acids
pphn01240
Biosynthesis of cofactors
pphn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU825_13105
09102 Energy metabolism
00680 Methane metabolism
HU825_13105
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU825_13105
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HU825_13105
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU825_13105
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HU825_13105
Enzymes [BR:
pphn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HU825_13105
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UIP87432
LinkDB
All DBs
Position
complement(2718403..2719656)
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AA seq
417 aa
AA seq
DB search
MFHKNLTLTQYDPALAQAIAAEDRRQEDHIELIASENYTSPQVMQAQGSGLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSSANSAVYLALLNAGDTLLGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDEQGLIDYDEVERLAVEHKPKMIVAGFSAYSRV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKKNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFRDYQAQVVQNARAMAEV
FVGRGYDVVSGGTDNHLMLVSLIRQGLTGKAADAALGSAHITVNKNAVPNDPQSPFVTSG
IRIGTPAVTTRGFGEGECRELAGWICDILDDIDNPAVIERVKGQVTDLCATFPVYVE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttccacaaaaacctaacgctgacccagtacgacccggcgctggcccaggccatcgcg
gccgaagaccgccgccaggaagaccacatcgagctgatcgcctcggaaaactacaccagc
ccgcaagtcatgcaggctcagggcagcggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggttgcgagtacgtcgacgtggtcgagcagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccgcattcgggctcctcg
gccaacagcgcggtgtacctggcattgctcaacgccggcgacaccctgctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtttcctcctcgggcaagctgtac
aacgccgtgcaatacggtatcgatgagcagggcctgatcgactatgacgaggtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgccggcttctccgcctattcccgcgtg
ctggatttcgcccgtttccgcgcgattgccgacaaggtcggcgcctacctgttcgtcgac
atggcccacgtcgccggactggtcgcggccgggctgtatcccaacccggtgccgttcgcc
gacgtggtcactaccaccacccacaagaccctgcgcggcccgcgtggtggtctgatcctg
gcgaagaagaacgaggagatcgagaagaagctcaactccgccgtattcccgggcgcccag
ggcggcccgctgatgcacgtgatcgccgccaaggcggtgtgtttcaaggaggcgctggag
ccgggctttcgcgactaccaggcgcaggtggtacagaacgcccgcgcgatggccgaagtc
ttcgtcggccgcggttatgacgtggtgtctggcggcaccgacaaccacctgatgctggtc
agcctgatccgccaaggactgaccggcaaggccgccgacgccgcgctgggcagcgcgcac
atcacggtgaacaagaacgccgtgcccaacgacccgcagtcgccattcgtgacctcgggc
atccgcatcggcacgccggcggtgaccacgcgcggtttcggcgagggcgagtgccgcgag
ctggccggctggatctgcgacatcctcgatgacatcgacaatccggcggtgatcgagcgc
gtcaaaggccaggtcaccgacctctgcgcgacgttccccgtctatgttgaataa
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