Pseudomonas phenolilytica: HU825_13900
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Entry
HU825_13900 CDS
T08532
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pphn
Pseudomonas phenolilytica
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphn03032
]
HU825_13900 (gyrA)
03400 DNA repair and recombination proteins [BR:
pphn03400
]
HU825_13900 (gyrA)
Enzymes [BR:
pphn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HU825_13900 (gyrA)
DNA replication proteins [BR:
pphn03032
]
Prokaryotic type
DNA Topoisomerases
HU825_13900 (gyrA)
DNA repair and recombination proteins [BR:
pphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU825_13900 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UIP87576
LinkDB
All DBs
Position
2896203..2899010
Genome browser
AA seq
935 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMARLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNADISIDELMRYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPADAKDALISTAWESSA
VEAMVERAGADACRPENLDPQYGLREGKYFLSPEQAQAILDLRLHRLTGLEHEKLLSEYQ
EILAQIGELIRILTNPVRLMEVIREELENVKRDFGDARRTEILESRLDLTLADLITEEER
VVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAPEGDEELDDEALV
IEHDEADESESEDADDDGRDEPTGAYIFMATAKGTVKKTPLVQFSRPRTSGLIALKLEEG
DTLIAAAVTDGAREVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRIISMLIPE
SGAQILTASLRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLIGAVQVLEGEEIMLIS
DQGTLVRTRVDEVSSLGRNTQGVTLIKLGKGEHLVGLERVQEPSEEEVLEDIEALLNEEA
LEKEMPVISTEPSEDELLGGAGDVSPDVVPTDDEQ
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgaactcaagcagtcc
tacctcgattacgccatgagcgtcatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagccggtgcatcgccgcgtgctttttgccatgagtgagctgggcaacgactggaac
aagccgtacaagaagtctgcccgtgtggtcggcgacgtgatcggtaaataccacccacac
ggcgattcggcggtctacgacaccatcgtgcgtatggctcagccgttctcgctgcgctac
atgctggtcgacggccagggcaacttcggttccgtcgacggcgactcggcggccgccatg
cgttacaccgaggtgcgcatggcgcgcctggcgcacgaactgctcgcggacctggacaag
gaaaccgtcgactgggtgccgaactacgacggcaccgagcagattccggcggtcatgccg
accaaagtcccgaacctgttggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggcgaggtcatcgacggctgtctggcgctgatcgataac
gccgacatcagcatcgatgagctgatgcgctacattcccggtccggatttccccacggca
ggcatcatcaacggccgtgccggcatcatcgaggcctatcgtaccggccgtgggcgcatc
tatatccgcgcgcgcgccgatatcgaggacatcgacaaggtcggcggtcgtcagcagatc
gtcatcaccgagctgccgtatcagctgaacaaggcgcggctgatcgagaagatcgccgag
ctggtgaaagagaagaagatagaaggtatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtggtcatcgaactgcgtcgcggcgaagtgccggaggtaatcctcaacaac
ctctatgcccagacccagctgcagagcgtattcggcatcaacgtggtggcgctggtcgat
ggtcagccgcgcacgctgaacctcaaggagctgctggaagcgttcgttcgtcaccgccgc
gaagtcgtcacccggcgtaccgtctacgaactgcgcaaggcgcgtgagcgtggccatatt
ctcgaaggccaggcggtcgcgctgtccaacatcgatccggtcatcgcgctgatcaaagcg
tcgccgacgccggccgacgccaaggatgcgctgatttccaccgcgtgggagtccagcgcc
gttgaggcgatggtcgagcgtgccggtgccgatgcgtgccgcccggagaatctcgatccg
cagtacggactgcgcgaaggcaagtacttcctgtcgccggagcaggcccaggcgattctc
gatctgcgtctgcaccgcctgaccgggctcgagcacgaaaagctgctcagcgaataccag
gaaatccttgctcagattggcgagctgatccgcatcctgaccaaccccgtgcggctgatg
gaagtcattcgcgaggagctggagaacgtcaagcgcgatttcggcgatgcgcgtcgcacc
gagattctcgaatcccgcctggacctgacgctggccgacctgatcaccgaagaagagcgc
gtagtcaccatttcccacggcggctatgccaaatcacagccgctggccgcctaccaggcg
cagcgccgtggcggccgcggcaaggccgcgaccggggtgaaggaagaggattacgtcgag
cacctgttggtcgccaacagccacaccacgctgttgctgttctccagcaagggcaaggtc
tactggctcaagacctacgaaattcccgaggcatcgcgcacctcgcgcggccgaccgttg
gtcaacctgctgccgctcgacgagggcgagcgtatcaccgccatgcttcaagtcgatctg
gaagcgctgcgcaagcaggcgccagaaggcgacgaggagctggatgacgaagcgctggtc
atcgagcatgacgaggcggatgaaagcgagtcggaagacgccgacgatgacggtcgggat
gagccgaccggcgcctacatcttcatggcgaccgccaagggtacggtcaagaagacgccg
ctggtgcagttcagccggcctcgtacatcgggcctcatcgcactgaaactggaggagggc
gacaccctgattgccgccgccgtgacggatggcgcgcgagaagtgatgatgttctccgat
ggcggcaaggtcatccgtttcaaggaaagcaaggttcgcatcatgggccgcaacgcccgc
ggtgtgcgcggtatgcgtctgcccgaagggcagcgcatcatctcgatgctgattccggaa
tcgggtgcgcagatccttaccgcatccttgcgtggctacggcaagcgcaccgcgatggaa
gagtttccacgccgcggccgcggtggtcagggcgtcatcgccatggtcaccaacgagcgt
aacggtccgctgatcggtgccgtgcaggtgctcgagggcgaggaaatcatgctgatttcc
gaccagggcacgttggtgcgcacgcgcgtcgacgaagtgtcgtcgctgggtcgtaacacg
cagggtgtcacgctgatcaagctcggcaagggtgagcatctggtcggcctggagcgggtg
caggaaccgtccgaagaggaagtgctggaggacatcgaggcgctgctcaacgaggaagcg
ctggagaaagagatgcccgtgatcagcaccgaaccgagtgaagacgagttgctgggcggc
gctggcgacgtgtcgcctgatgtcgtgcctaccgacgacgagcagtga
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