Pseudomonas phenolilytica: HU825_15210
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Entry
HU825_15210 CDS
T08532
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn03030
DNA replication
pphn03430
Mismatch repair
pphn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU825_15210 (dnaX)
03430 Mismatch repair
HU825_15210 (dnaX)
03440 Homologous recombination
HU825_15210 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphn03032
]
HU825_15210 (dnaX)
03400 DNA repair and recombination proteins [BR:
pphn03400
]
HU825_15210 (dnaX)
Enzymes [BR:
pphn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU825_15210 (dnaX)
DNA replication proteins [BR:
pphn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU825_15210 (dnaX)
DNA repair and recombination proteins [BR:
pphn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU825_15210 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_14
AAA_18
AAA_2
AAA_30
DUF3646
TIP49
AAA_19
PIF1
TsaE
nSTAND3
AAA_7
AAA_24
Rad17
zf-CXXC
Herpes_Helicase
SKI
Motif
Other DBs
NCBI-ProteinID:
UIP87815
LinkDB
All DBs
Position
complement(3183490..3185478)
Genome browser
AA seq
662 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGVSSTPCGECSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRY
KVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLAHVLGAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGRVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLEAVRQLAEQGPDWAGVLAEMLNVLHRVAIAQALPE
AIDNGQGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRP
ADREDAPRTQLKHLGVSPATADSDRAPVAAAATAPASVPAVAVPPVTVPPSVATVTEVVP
PVEEASTVQTPALPANEPAAPPVIDVPWDESPSTAQTTPEATAVEPVPSLVIAAEQPAPL
APVEDTDDDEPPFSDEDYYEVENQVEAYLDDLVETHAAVASEPLPAAEPATGLAADWLEL
YLKLGLSGLTGSIAANCTLIEVDGDRWLMHLDPAQSALFNATQQRRLNDALDQYHGRKLQ
LEIKLEKPQQETPAQAAARRREERQRAAERSIQADPMVQQLMQQFSAVIRDGTIEPVEHT
ET
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagcccgcaaatggcgtccgcgctcgttccgcgaaatggtcggg
cagacgcacgtgctcaaggccctgatcaatgcgctggacaatcagcgtctgcaccatgcc
tatctgtttaccggcacccgcggcgtgggcaaaaccaccatcgcgcggattatcgccaag
tgtctgaactgcgaaactggcgtcagctcgaccccttgtggcgagtgctcggtgtgccgc
gagatcgacgaggggcgcttcgtcgacctgatcgaagtcgatgccgcgagccgcaccaag
gtcgaggacacccgcgaactgctggacaacgtgcagtacgcgccgagccgtggccgctac
aaggtctacctgatcgacgaagtgcacatgctttcgtcgcattcgttcaatgcgctgctc
aagacgctcgaagaaccgccgccgcacgtcaagttcctgctggcgaccacagacccgcag
aagctgcccgttaccatcctttcgcgttgcctgcagttctcgctgaagaacatgccgccg
gagcgggtggtcgagcatctggctcacgtgcttggtgcggagaacgtaccgttcgaggaa
gacgccctgtggctgctcggccgggcggcagatggctcgatgcgcgatgcgatgagcctg
accgaccaggcgatcgcctttggcgaggggcgggtgctcgccgccgatgtgcgcgcgatg
ctcggcacgctcgatcatgggcaggtctacggtgtattgcaggcgttgctcgaaggtgac
gcgcgcgcactgctcgaagccgtgcgccagctggccgagcaaggcccggactgggccggc
gtgctggcagaaatgctcaatgtgctgcaccgcgtggccattgcccaggcgctgccggaa
gcgatcgataacggccagggtgaccgcgatcgcgtcctcgcgctggctcaggcgttgccc
gccgaggatgtgcagttctattaccagatggggttgatcggccggcgcgacctgccgttg
gcgcccgatccgcgcagtggcttcgagatggtgctgctgcgcatgctggcgttccgtccc
gccgaccgcgaagatgcgccgcgaacacagttaaagcatttgggagtcagcccggccacg
gctgattccgacagggctccggtggccgcagcggccaccgcgcctgcttccgtgcctgcg
gtggctgttccgcctgtcaccgtgccgccgagcgttgcaaccgtgaccgaggtcgtcccg
ccggtcgaggaggcatccaccgttcagacaccggcattgcccgcgaacgagcccgctgcg
ccgccggtcatcgacgtgccctgggacgaatcgccaagtactgcgcagacgacgcctgag
gcgaccgctgttgagccagtaccgtcactcgtcatcgcggccgaacagccggcaccattg
gctccggtggaggatacggacgacgacgagccaccgtttagcgacgaggactattacgaa
gtcgaaaaccaggtcgaagcctatctggacgatctggtcgagactcacgccgccgttgcc
agcgaaccgttgccggcggccgaaccggcaaccgggctggctgctgattggctggagctg
tatctcaagctcggcctgtccggcctgaccggcagcattgccgccaactgcacgctgatc
gaggtggacggcgaccgctggttgatgcatctggatccggcgcagagcgcactgttcaac
gccactcagcagcggcgcctgaacgacgcgctggatcagtaccacgggcgcaagctgcag
ctggagatcaagctggagaaaccgcagcaggaaacgccggcgcaggccgcggcgcgccgt
cgcgaagagcgtcagcgcgcggcggagcgatcaatccaggccgatccgatggtgcagcaa
ttgatgcagcaattctctgccgtgattcgagacggcacgatcgaacctgtagaacacacc
gaaacctga
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