Pseudomonas phenolilytica: HU825_18265
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Entry
HU825_18265 CDS
T08532
Name
(GenBank) DEAD/DEAH box helicase
Organism
pphn
Pseudomonas phenolilytica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SWIM
ResIII
KRAB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UIP88380
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All DBs
Position
3834971..3838255
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AA seq
1094 aa
AA seq
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MARDFLTRLPPTWALGFSDNALARGKQYAEEDRVTLLREDDGLIEASCRGTGGKRYRQSL
LLDKRGGLSCVCSCPVGLACKHAAAVIHHLQQLAEHAPQGADASPEGELPDALRHWLAQL
PRALGEDTGQDAPTHCLHYRLLPDLYVEVNKVRLRQDGSVAAREPYPAVREATFRQPRFM
QPLDLHIAALLALAPIASNRFALTGENGAEALRLLLESGRAFLDWDAPALQPGHRRSARF
AWQQHEGALRPVLEVEGGAEALTAVDPLYYRDDASNEVGLIEHGLSAPLARHLLEAPAVS
PNQAGLFSLSLSEIAPQLPVPTKAEEQRIDDLQPIARLTLGSHQAMNWQPASGRMVNEQQ
HRAGLSFVYGSLATHGKLKGEQRLRQAEGERVLSIARQPAAEQALRQQLQQLGFRPALRQ
SPALPKDSAEMFELPSESAWQHFADTQLPLLRQQGWQIVMQPGFAYDLAPVEQWYAELDE
SPEHSWFDLQLGILVEGERISLLPVLLSVIRRNPALLSPQHLAQRADDETLRVALGRRSA
VDDRPLQVLLPFGRLKPILATLGELYLRDQPAGDSLRLSRLDAARLGQLDALPFAWSGGE
QLLDFARRLRDYNQQPVAAPPGLRATLRPYQLDGLSWMQALRALDVGGILGDDMGLGKTL
QTLAHLLLEKQAGRLDRPSLVVMPTSLIPNWQDEAARFTPQLRVLTLHGSDRQRHFAQLA
GHDLLLTTYALLPRDIEQLVAQPLHLLVLDEAQNIKNASSKAAQAAGRLVARQRLCLTGT
PLENHLGELWSLFHFLMPGWLGDARSFTRSYRTPIEKHGDRDRLQHLIARIRPFLLRRRK
EDVARELPPKTEIVHWVDLNPAQRDLYETVRLAMDRKVREEIDRKGLARSQIVILEALLK
LRQVCCDLRLVKADGARVARSGHSAKLDSLMQMLDELLAEGRRVLLFSQFTSMLALIEDE
LRQRGIPYVIITGDVRDRRTPVRQFQNGEVPLFLISLKAGGTGLNLTAADTVIHYDPWWN
PAAENQATDRAYRIGQDKPVFVYKLITRGSVEEKIQQLQTRKSELASGVLDSGGTDDWRL
QQSDIDALLAPLPD
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggccagggattttctcacccggctgccaccgacctgggcgctgggcttctcggacaac
gcgctggcgcgcggcaagcagtacgccgaggaggatcgcgtcaccctgctgcgcgaggac
gacgggctgatcgaggccagttgtcgcggcaccggcggcaagcgctaccggcagtcgctg
ctgctggacaagcgcggtgggctcagctgcgtttgcagctgcccggtggggctggcctgc
aagcacgccgcggccgtcatccaccacctgcagcagctggccgagcacgccccacagggc
gccgacgcctcgccggagggcgagctgcccgacgccctgcggcactggctcgcgcagttg
ccacgtgcgctcggcgaggacaccggccaggacgcgcccacgcactgtctgcattaccgg
ctgctgccggacctctacgtggaagtgaacaaggtgcgcctgcgacaggacggatcggtc
gctgcgcgcgagccgtacccggccgtgcgcgaggccacgttccgccagccgcgcttcatg
cagccgctggacctgcatatcgctgccctgctggcgctcgcaccgatcgccagcaaccgc
ttcgccctgaccggcgagaacggtgccgaggctctgcgtctgctgctggaaagcggtcgc
gcctttctcgactgggatgccccagcgctgcaaccaggccatcgccgctcggcccgtttc
gcctggcagcagcacgaaggcgcgctgcgtccggtgctggaagtcgagggcggcgccgag
gcgctgaccgccgtggacccgctgtactaccgcgacgacgcgagcaacgaggtcggcctg
atcgaacacggcctgtcggcacccctggcgcgtcacctgctcgaagcccccgcggtgtca
ccgaaccaggccgggctgttcagcctctcgctcagcgagatcgccccgcagctgccggtg
ccgaccaaggccgaagagcagcgcatcgacgacttgcagcccatcgcccggctgacgctc
ggcagccatcaggcgatgaactggcagccggccagcgggcggatggtcaacgagcagcag
caccgcgccggcctgagcttcgtctacggcagcctcgccacgcacggcaagctcaagggc
gagcagcgtctgcgtcaggccgagggcgagcgtgtgctcagcatcgcccgccagcctgcg
gccgaacaggcgctgcgccagcaactgcagcagctgggtttccgcccggcgctgcgccag
agcccggcgctaccgaaggattcggcggaaatgttcgagctgcccagcgagagcgcctgg
cagcacttcgccgacacccaactgccgttgctgcgccagcagggttggcagatcgtcatg
cagcccggtttcgcctacgacctggcgccggtcgagcagtggtacgccgagctggacgaa
tccccggagcacagctggttcgacctgcagctgggcatcctcgtcgaaggcgagcgcatc
agcctgctgccggtgctgctcagcgtcatccgccgcaatcccgccctgctctcgccgcag
cacctggcccagcgcgccgacgacgaaacgctccgggtcgcgctgggccggcgcagcgcg
gtagacgaccgaccgttgcaggtgctgctgcccttcggccggctgaaaccgatcctcgcc
acactgggcgagctgtacctgcgcgaccagccggccggcgacagtctgcgcctgtcacgc
ctcgacgccgcgcgcctgggccagctcgacgcgctgccgttcgcctggagcggcggcgag
cagctgctcgatttcgcccggcgtctgcgcgattacaaccagcagcccgtcgccgcgcca
ccgggcctgcgcgcgacgctgcgcccctaccagctcgatggtctgagctggatgcaggcg
ctgcgcgcactggacgtcggcggcatcctcggcgacgacatgggcctgggcaagacgctg
cagaccctggcccacctgctgctggaaaagcaggccggccgtctcgatcgcccgagcctg
gtggtcatgcccaccagcctgattcccaactggcaggacgaagcagcgcgcttcaccccg
caactgcgcgtgctcacgctgcacggcagcgatcgccagcggcatttcgcacagctcgcc
gggcacgacctgctgctgaccacctacgccctgctgccgcgcgacatcgaacagctcgtc
gcgcagccgctgcacctgctggtgctggatgaggcgcagaacatcaagaacgccagcagc
aaggccgcgcaggccgccggccggctggtcgcccggcagcgtctgtgcctgaccggcaca
ccgctggaaaaccacctcggcgagctgtggtcgctgttccacttcctcatgcctggctgg
ctcggcgatgcgcgcagttttacccgcagctaccgcacgcccatcgagaaacacggcgac
cgcgaccgcctgcagcacctgatcgcgcgcatccgcccgttcctgctgcgtcggcgcaag
gaagacgtggcccgcgagctgccgccgaagaccgagatcgtccactgggtcgacctgaac
ccggcgcagcgcgacctctacgaaacggtgcgcctggcgatggaccgcaaggtgcgcgag
gagatcgaccgcaagggcctggcacgtagccagatcgtcatcctcgaagcgctgctcaag
ctgcgtcaggtctgctgcgacctacgcctggtcaaggccgacggtgcccgggtggcgcgt
agcggccattccgccaagctcgacagcctgatgcagatgcttgacgagctgctggccgaa
gggcggcgcgtactgctgttctcgcagttcacctcgatgctcgcgctgatcgaggacgag
ctgcgccagcgcggtatcccctacgtgatcatcaccggcgacgtccgcgaccggcgcacg
ccggtgcggcagttccagaatggcgaggtgccgctgttcctgatcagcctcaaggccggc
ggcaccggcctgaacctcaccgccgccgacaccgtcatccactacgacccctggtggaac
ccggccgcggaaaaccaggccaccgaccgcgcctaccgcatcggccaggacaagccggtg
ttcgtctacaagctgatcacccgcggcagcgtcgaggagaagatccagcagctgcagacg
cgcaagtcggagcttgccagcggcgtgctggacagcggcgggacggacgactggcgcctg
cagcagagcgatatcgatgcgctgctggcgccgctaccggactga
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