Pantoea phytobeneficialis: CTZ24_01400
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Entry
CTZ24_01400 CDS
T09899
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppho03021
]
CTZ24_01400 (rpoH)
Transcription machinery [BR:
ppho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CTZ24_01400 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
HTH_3
UCR_14kD
GntR
SANT_DAMP1_like
2Fe-2S_thioredx
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QGR05124
UniProt:
A0AAP9H2G5
LinkDB
All DBs
Position
317025..317882
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AA seq
285 aa
AA seq
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MTKEMQTLAIAPLGNLESYIRAANVWPMLSAEEEKALAERLHYQGDLDAAKTLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSSDDENGESKTMAPVLYLQDKTSDFADGIEEDNWDAHAADKLTDAMQGLDERSQHI
IRARWLDEENKTTLQELADQYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcctcttggtaacctggaatcgtatatt
cgggctgccaacgtctggccgatgctgtcggcagaagaggaaaaagcgctggctgaacgg
ctgcattaccagggcgatctggatgcggctaagacgctgatcctgtctcatctgcgcttt
gttgttcatatcgctcgtaactattccggttacggcttgccacaggcagacctgattcag
gaagggaacatcggcctgatgaaggcggtgcgtcgcttcaatcctgaagtgggtgtgcgt
ctggtgtcgtttgccgtgcactggattaaagctgagattcacgaatacgtgctgcgtaac
tggcgtattgtgaaggtcgctaccacaaaagcacagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggacgaagtcgagatggtagcgcgcgag
ctgggcgtgagcagcaaagatgtgcgtgaaatggaatcgcgcatggcggcacaggatatg
actttcgacatgtcgtctgacgacgaaaacggcgaaagcaaaaccatggccccggtgctg
tatctccaggataaaacgtctgactttgctgatggcattgaagaggacaactgggatgca
cacgccgccgataaactgaccgacgcgatgcagggcctggacgagcgtagtcagcacatc
atccgtgcgcgctggctggatgaagagaacaaaaccaccttgcaggaactggccgaccaa
tacggcgtttccgcagagcgtgtacgccagctggaaaagaacgccatgaagaaattacgt
atggcaattgaagcctga
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