Pantoea phytobeneficialis: CTZ24_04655
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Entry
CTZ24_04655 CDS
T09899
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_04655
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTZ24_04655
Archaeal homologous recombinant proteins
CTZ24_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
nSTAND3
cobW
AAA_21
MobB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGR05740
UniProt:
A0AAP9KNB2
LinkDB
All DBs
Position
complement(1027721..1031248)
Genome browser
AA seq
1175 aa
AA seq
DB search
MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGVLSQTQNELITRDTAECLAEVEFEIKGEAWRAFWSQNRARGQADGKLQAPRVELARCA
DNQIVADKVGDKLKLIETLSGLDFARFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE
IYGQISIQIFERYKSARADLDTLRARAGGMSLLDETRRAELASQLEQLNAAEVTLNQQLT
TAQQQQQWLSQSQQLAGEQQQAQQALQAAENAWHQAEPERQRLARAEPAEKLRDKLQQRT
QLEQENIALARQMQQVQAQHQQAIHAQQQGEARFHTAQQAREQAQHAQQQLETLLTEQVI
PLDQHIATLQQQVSEQQRQITAQQQLVQQNSTALSQQQQESERLQQLWDEQQQWRTREAS
VAAWGEHLARWQSDITRLDERELAVTQLSNQQQQQQQQLEQLQQAFAARQQALPAAPPAI
DQVRDTLAQHQVQRASRQQLTLLTAQWRSLQPQQQQRQAKLDTLTRHYQAEEQVLQALRE
EWKRENQAMLDVQTICDQERTIAQLADERARLQPNHPCPLCGSCQHPAIEQYRQLEPGEN
QQRLAALQTRVAQLKESGTAKGEQQRLSLLQQQALQQELREIGQQLSTLSEQWQSLTGEL
ALTFTLEQQDDVTRWQREQDQQENQLREWLEHLQQQQLAQQQITSVQQTLNDLNQRSEAE
RAAWQQLSQQLAQQLTQHQLTLPAREAREDWLSALQLRWQKWQESERLLTTLQPQLAKAN
SEHHNLQQNLAREQQRLAALQQTFSTLQQQCSEQQQRRQQLFGDRQVQAERQAHQAALHK
CEQEVAQQLQAWQQAQSAAHSLDGQRAQIEQQQQAQTARLEAATRDFLSALQRSDFADEA
ALRAALLDATDVEQLRQRLQALEQQHQQHITLSQQLTQRVTAHQQQRPAELSDELAAEIG
PRLENLRVALRDNARQQGEAQQQLSSDTQLREQQQALLTQISSHEAELVQWSQLNELIGS
AKGDKFRRFAQGLTLDHLVWLANRQLDRLHGRYLLQRRATDELELDVVDTWQADATRDTR
TLSGGESFLVSLALALALSDLVSRKTRIESLFLDEGFGTLDAETLDTALDALDALNASGK
TIGVISHVEAMKERIPVQIRVRKMNGLGYSKLELP
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgacgctgcgttttaaaaacctcaacgccctgcgcggagaatggtttatc
gattttcgccgtgagccatttgccagtaacggtttgtttgccattaccggggccaccggc
gccggtaaaaccaccctgctcgacgccatctgtctggcgctgtatcaccagacgccacgc
ctcggcgtgctgtcgcaaacccagaacgaactgatcacccgggataccgccgaatgcctc
gccgaggtggagtttgagatcaagggtgaagcctggcgtgccttctggagccagaaccgc
gcccgtggtcaggccgacggcaaattgcaggctccgcgcgttgagctggcgcgctgtgcc
gacaaccaaattgttgccgacaaagtgggcgacaaattaaaactgatcgaaaccctatcc
ggtcttgatttcgcccgctttacccgctcaatgatgctgtcgcaggggcaatttgctgcc
tttttgaatgccaaacctggcgagcgcgccgagctgctggaggagctgaccggcaccgag
atctacggtcaaatctcaatccagattttcgagcgctacaaaagcgcgcgtgccgatctc
gacacgctgcgcgcccgcgccggaggaatgtcgttgctggatgagacgcggcgggctgag
ctggcaagtcagttggaacaactcaatgcagccgaggtcacgctgaaccagcagctcacc
actgcgcagcagcaacaacagtggctgagtcagtcacaacaattggctggcgaacagcag
caggcgcaacaggcgttgcaggcggcagaaaacgcgtggcaccaggccgaacctgaacgt
cagaggctggcgcgcgccgaaccggcggaaaaattacgcgataaactgcaacagcgcaca
cagctggaacaggaaaatatcgccctcgcccggcaaatgcagcaggtgcaagcgcagcat
caacaggcgatccatgcccagcagcaaggtgaagcacgtttccacacggcccaacaggcg
cgcgagcaggcacagcacgcacaacaacaactggaaacgctgctgaccgagcaggtcatc
ccacttgatcaacacatcgcgaccctgcaacagcaggtcagcgaacagcagcgccagata
acggcgcaacagcagttggtgcagcaaaacagcaccgcactcagccagcaacaacaggag
agtgaacgcttacaacaactgtgggatgagcagcaacaatggcgcacccgcgaagccagc
gtcgcggcctggggcgagcatctggcgcgctggcaatccgacattacccggctggatgaa
cgtgagctggccgtcacccagttgagcaatcagcaacagcagcaacaacagcagcttgag
cagctccagcaagctttcgctgcccgtcagcaggcgctgccagccgcgcctcctgctatc
gatcaggtccgtgatacgttagcgcaacatcaggtgcaacgtgcatcgcgtcagcaactg
accctgttgacggcgcagtggcgttcactccagccacagcaacaacaacgtcaggcaaaa
ctggatacgcttacccggcactatcaggcggaagaacaggttttacaggcgctgcgcgag
gagtggaagcgtgagaatcaggcgatgcttgatgtgcagaccatatgtgaccaggaacgc
acaatcgctcaactggccgatgaacgtgcccgcttgcagcctaatcatccttgcccgctg
tgtggttcctgtcagcatccggccattgagcaatatcgccaactggaacctggcgagaat
caacagcgtcttgcggcattgcaaactcgtgttgctcagctcaaagaatccggcaccgcc
aaaggtgagcagcaacgcctgtcattgctgcaacagcaggcgttgcagcaggaactcagg
gaaatcgggcagcagctcagcacgctgagtgagcagtggcaaagcttgaccggtgagctc
gcgctcaccttcacgctggagcagcaggacgatgtgacccgctggcaacgcgagcaggat
cagcaggaaaatcagctacgggaatggctggagcatctgcaacagcagcaactggcacag
cagcaaattaccagcgtgcagcagacgctgaacgatctcaaccagcgtagcgaagccgag
cgggctgcgtggcagcaactcagccaacaactggcacagcaactgacccaacatcagctc
accctacccgcgcgcgaggcgcgtgaagactggttgagcgcgttgcagctacgctggcag
aaatggcaggagagtgagcggttactcaccaccctgcaaccgcagctggcgaaagccaac
agcgagcaccacaacctgcaacagaatcttgcgcgtgaacagcagcgtctcgcggcgttg
caacaaacgttcagcaccttgcaacagcaatgcagcgaacagcaacagcgtcggcagcaa
ctgtttggcgaccgccaggtgcaggccgaacgtcaggcgcaccaggcggcgctacacaaa
tgcgaacaggaagtagcgcagcaattacaggcctggcagcaggcgcaaagcgccgcgcac
agcctggacggccaacgcgcgcaaatcgaacagcagcaacaggcacaaaccgctcgtctg
gaggcagcaacccgagatttcctcagcgctttgcagcgcagtgattttgccgacgaagcc
gcactacgcgcagcgctgcttgatgctaccgatgttgagcaactgcgtcagcgtttacag
gcgctggaacaacagcatcaacagcacatcaccctgagccaacaactgacgcagcgcgtc
actgcccaccagcaacaacgtccggccgaactgagcgacgaactggcggcagagatcggc
ccccggctggaaaacttgcgcgtggcgctgcgcgacaacgcacgtcaacagggagaggca
cagcagcagctgtccagcgacacgcaactacgtgagcagcagcaggcgctgttgacgcaa
atcagcagccacgaagcggaactggtgcaatggagccaacttaacgagttaatcggctcc
gccaaaggtgacaaattccgccgtttcgcccaggggttaacccttgatcacctggtatgg
ctggcgaaccgtcagctcgatcgcctgcatggtcgttatctgctgcaacgtcgtgccacg
gatgagctggaactggatgtggtggatacctggcaggccgatgccacccgcgacacccgc
acactgtccggtggcgagagttttctggtcagcctggcgctggcgctggcgttatccgac
ctcgtcagccgcaaaacccgcatcgaatcgctgttccttgatgaaggctttggcacgctg
gatgccgagacgctcgacaccgcgctggacgcgctcgatgcgttgaacgccagcggcaaa
accattggcgttatcagccatgtggaagcgatgaaggagcgtattccggtgcagatcagg
gtacgtaagatgaatggtctgggatacagcaaactggaattgccgtaa
DBGET
integrated database retrieval system
