Pantoea phytobeneficialis: CTZ24_06045
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Entry
CTZ24_06045 CDS
T09899
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTZ24_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_06045
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTZ24_06045
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CTZ24_06045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF8810
SBDS_domain_II
DUF87
Motif
Other DBs
NCBI-ProteinID:
QGR05986
UniProt:
A0AAP9H421
LinkDB
All DBs
Position
1309641..1311662
Genome browser
AA seq
673 aa
AA seq
DB search
MSKAFKLNSEFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLAELQ
YTRNDQVFQRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGQVVSVVPR
FTVYPKTHYVTPRERILQSMEEIKKELVVRRQVLLENNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PILEVRPVTTQVDDLLSEIRKRVEVNERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYADKITNSMARAIEETERRREKQERYNEANGIVPQGLNKKITDILELG
KNVVKTRGKGKTATRSAAEAEASYLALTPQAMQKKIHELEGQMQQHAQNLEFEEAARVRD
QLHELRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagccttcaaactcaactccgaatttaaaccctcaggggatcagcctgaggcg
attcgtcgtctggaagaggggctggaagacggtctggcacaccagacgctgttgggggta
accggttcgggtaaaacctttaccatcgccaatgtgatcgccgatctcaaccggccaact
atggtgctggcgcctaacaagacccttgcggcacagctctacggagagatgaaggagttc
tttccggacaacgcggtggagttcttcgtctcctactacgactactatcagcctgaagcc
tatgtgcccagctccgatacctttatcgaaaaggatgcctcggtgaatgagcacatcgag
cagatgcgtctgtctgccaccaaggcgttgctggagcgacgtgacgttatcgtggtggcg
tcggtgtcggccatctacggtctgggtgaccctgatctctacctgaaaatgatgctgcac
ctgacgcgtggcatgatcatcgatcagcgcagcattctgcgtcgtctggctgagctgcaa
tatacccgtaatgatcaggttttccagcgcggcaccttccgcgtgcgcggtgaagtgatc
gatatcttcccggcggagtccgatgagattgcgctgcgtgtggagctgtttgatgaagaa
gtggagcggttgtcattgtttgacccgctgaccggtcaggtggtttcggtggtgccgcgt
tttaccgtctatccgaaaacccactatgtcacgccgcgcgaacgcatcctgcaatcaatg
gaagagatcaaaaaggaactggtggtgcgccgtcaggtcctgctggagaataataagctg
ctggaagagcagcgcattacccagcgtacccagtttgacctcgaaatgatgaacgaactc
ggctactgctcgggtatcgagaactattcacgctacctgtccggacgtgggccaggcgag
ccgcctccgacgctgttcgactacttaccggcagatggtctgctggtggtggatgagtcc
catgtgaccatcccgcagattggcgggatgtatcgcggtgaccgcgcacgtaaagagacg
ctggtggagtatgggttccgcctgccgtcggcgctggacaaccgcccgctccgcttcgaa
gagtttgaagcgctggcaccgcagaccatttatgtttcggcaacgccgggtaattacgag
ctggagaaatccggtggtgaggtgattgatcaggtggtgcgtccgacagggctgctcgat
ccgatcctcgaagtacgtccggtgaccacccaggtggatgacctgctgtcggagatccgc
aaacgcgtcgaggtcaacgaacgtgtgctggtgaccaccctgactaaacgcatggcggaa
gatctcaccgaatatctggaggagcacggcgagaaggtgcgttatctgcactcagacatc
gatacggtggagcgtatggagatcatccgcgacctgcgtctgggggaatttgatgtgctg
gtggggatcaacctgttgcgtgaagggctggatatgccggaagtgtcgctggtggcgatt
ctcgatgccgataaagagggcttcctgcgttcggagcgttctctgattcagaccattggc
cgcgccgcacgtaacattaacggtaaagcgattctttacgcagataagatcaccaactca
atggcacgcgccatcgaggagactgagcgacgtcgtgagaagcaggagcggtataacgaa
gccaacggcatcgtgccgcagggactgaacaaaaaaatcaccgatattctggagctgggc
aaaaacgtggtcaaaacccgtggcaagggcaaaaccgccacgcgcagcgccgctgaagcc
gaagccagctatctggcgctcaccccgcaggcgatgcagaagaagattcacgagctggaa
ggacagatgcaacaacacgcgcagaatctggagtttgaagaagcggcacgggtgcgtgat
cagttgcacgaactgcgcgagctgtttatcgctgcgtcctaa
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