Pantoea phytobeneficialis: CTZ24_06820
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Entry
CTZ24_06820 CDS
T09899
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppho03009
]
CTZ24_06820
Ribosome biogenesis [BR:
ppho03009
]
Prokaryotic type
ribosomal protein modification factors
CTZ24_06820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QGR06136
UniProt:
A0AAP9H4D8
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Position
complement(1479793..1481556)
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLQDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGESIAKGEFVHYPNEKWFPLPEDGSLPAG
ILDTRLRKFYDPEDSLSASDLIDLQSGNAERGICGLPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERHIKNRIIAESISLPEIPEAVMQRYPGVVEAIARLEAE
GFPIFAYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKDDADYPFVDWSFAGSTHEEFDTLM
AIFRAEDKEVYIADYEHLSVYACRIIVPGMSDIYPAEDLLLANNNMGAPLRETLLALPAS
QWEPEAYLDLITQLDEEGHDDFTRVRELLGLASGKDNGWFTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNQSIFSAERANYYRCLQTLLLLAMEEERDPVQYHRAFIRMYGEAAVDAA
SAAISGEAPFYGLQAVDLDLKAFPAHQSLLAAYEKLQAAKRRYWLAK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacttttattccaggtaaagacgctgcactggaagactccatttcacgtttc
cagcaaaaattgcaggatttgggttttaacattgaagaagcctcctggctgaaccctgtc
cctcatgtgtggtcagtccatattcgcgatcgtgactgcccgctgtgctttaccaacggt
aaaggtgccagcaaaaaggccgcgctggcttctgcgctgggcgaatactttgagcgcctc
tcaaccaactacttctttgctgacttctggctgggtgagtccatcgctaaaggcgagttt
gtccactatcccaacgagaagtggttccccttacctgaagatggcagcctgccagcaggg
atcctcgatactcgcctgcgtaaattctatgatcctgaagatagcctgagcgcgagtgac
ctgatcgacctgcaatccggcaatgctgagcgtggcatttgcggcctgccctttacacgt
cagtcagaccagcagaccgtctatattccgatgaatattatcggcaacctgtatgtgtcc
aacggaatgtcagcaggtaacaccgctaacgaagcgcgtgtacagggactgtccgaggtg
ttcgagcgccatattaaaaaccgcatcattgctgaatccatcagcctgccagaaattcct
gaagccgttatgcagcgctatcctggcgtggttgaggccatcgcacgtctggaagctgaa
ggcttcccgatttttgcctatgacgcctccctcggcggtaaatacccggtgatctgtgtg
gtgctgttcaacccagcgaacggcacctgtttcgcttcatttggtgcacatcctgatttt
ggtgtggcgctggagcgtaccgttaccgagctgctgcaaggtcgtggcctgaaagatctc
gacgtgttcacgccgccaaccttcgatgatgaagaagttgccgagcatgccaacctggaa
acccactttattgattcaagcggtctgatttcctgggatatgttcaaagacgatgccgac
tatccgtttgttgactggagctttgctggcagcacacatgaagagtttgacacgctgatg
gctatcttccgcgctgaagataaagaagtgtacatcgccgattacgagcatttgagcgtg
tatgcctgccgcatcattgtaccgggcatgtctgatatttacccggcggaagacttgctg
ctggcaaacaacaacatgggcgcaccgctgcgtgaaaccctgctggccctgccggcgagc
caatgggagccggaagcctatctggatctgatcacccaactggatgaagaaggtcacgat
gacttcacccgtgttcgcgaattgctgggtctggcatcgggcaaagacaatggctggttt
acgctgcgtattggcgagctgaaagccatgctggcactggctggtggtgacctcgatcag
gcactgatctggactgaatggacgatggaatttaaccagtcaatcttcagtgctgagcgt
gctaactactaccgctgcctgcaaaccctgctgctgctggctatggaagaggaacgcgat
ccggttcaataccaccgcgcctttatccgtatgtacggtgaagcagccgttgacgcggca
tcagccgctatcagcggtgaagcgccgttctacggcctgcaagccgtggatttagatttg
aaagccttcccggctcatcagtcgttgctggcagcttatgaaaagttacaggcggccaaa
cgtcgttattggttagcgaaataa
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