Pantoea phytobeneficialis: CTZ24_10765
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Entry
CTZ24_10765 CDS
T09899
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppho03016
]
CTZ24_10765
Enzymes [BR:
ppho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CTZ24_10765
Transfer RNA biogenesis [BR:
ppho03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CTZ24_10765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
QGR06869
UniProt:
A0AAP9KPF1
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All DBs
Position
2306176..2308110
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTDKDRESAEPESLVEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIQCRAARGVTH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFITTADDHLAPWWVTLSRHNLEREAPEVGFG
EMIDEYLTREDLTALDFVTIDSASTEDMDDALYAEETAEGNLLLTIAIADPTAYVPEGSA
LDKLAAKRAFTNYLPGFNIPMLPRELSDDVCSLRPNVRRPALACRVTVLKDGSLADDIHF
FAAWIESKAKLVYDEVSDWLENNGSWQPASDAIAQQIRLLHRLCLARGDWRQTHALVFKD
RPDYRFVLGEKGEVLDIIAEPRRIANRIVEEAMILANVCAARVLQQKLGFGIYNVHTGFD
LANAEQAAGVLAGHGITVDAQAITTLEGFRQLRRELDAQPTQYLDSRIRRFQAFAEISTE
PGPHFGLGLEAYATWTSPIRKFGDMINHRLLKAIIRGEAINRPQDDVTVTMSERRRLNRM
AERDVGDWLYARFLAPFAGGDRKFSAEIIDVSRGGMRVRLLENGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGEVVYRVTDVIDVTIAEVRMETRSVVARPAS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctgaaagagaagctccacgcgcagacgccg
cgcgccgaaggcgtggtgaaaggcacggaaaaaggttttggctttctggaggttgatgct
cagaaaagctacttcattccaccgccgcaaatgaagaaagtgatgcacggcgaccgcatc
gttgctgtgatccacaccgataaagatcgcgaaagtgccgagccggaaagcctggttgag
ccattcctgacgcgttttgtcggccgcgtacagaagaaagatgatcgcctgtctatcgtg
ccagatcatccgctgctgaaagatgctattcagtgccgtgctgcccgtggcgtgacccac
gatttccaggccggtgactgggccgtggctgaaatgcgtcgccatcctctgaaaggcgat
cgtggcttttatgccgaactgaccgaatttattaccactgcggatgaccatctggcaccg
tggtgggtcacgctgtcgcgccacaacctggagcgtgaagcgccggaagtcggttttggt
gagatgattgatgagtatctgacgcgtgaagacctgaccgcgctcgatttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtacgcagaagagactgccgaaggc
aacctgctgctgactatcgccattgccgatcctaccgcttatgtgccggaaggcagcgcg
ctggacaaactggccgcgaaacgcgccttcactaactatctgccgggcttcaacatcccg
atgctgccgcgtgaactgtctgatgacgtttgctcgctgcgcccgaatgtacgccgtccg
gcgctggcgtgccgcgttaccgtgttgaaagacggtagcctggccgacgatatccatttc
tttgccgcctggatcgaatccaaagctaaactggtctatgacgaagtatcagactggctg
gaaaacaacggtagctggcagcccgccagtgatgccattgcccaacagattcgtctgctg
catcgtctgtgtctggcgcgcggcgactggcgtcaaactcacgccctggtgttcaaagac
cgtccggattaccgctttgtcctgggtgaaaaaggtgaagtgctggatatcattgccgag
cctcgccgcatcgcgaaccgtatcgtagaagaagcgatgatcctcgcgaacgtctgtgcc
gcccgcgtgctgcaacagaagctgggcttcggtatctataacgtgcataccggtttcgac
ctcgccaacgccgaacaggcagcaggcgtgttggccggacacggtatcaccgttgatgcg
caggccatcactacgctggaaggtttccgtcagctgcgccgtgagctggatgcccagccg
acccagtatctcgacagccgtatccgtcgtttccaggcctttgctgaaatcagcaccgag
ccaggcccgcactttggccttggtcttgaggcttacgctacctggacctcacccatccgt
aagttcggcgatatgattaaccatcgcctgctgaaagccattattcgcggtgaagcgatc
aatcgcccgcaggatgatgtgaccgtgaccatgagcgaacgtcgccgcctgaaccgtatg
gccgagcgcgatgtcggtgactggttgtacgcgcgtttcctcgcgccgtttgccggtggc
gatcgcaagttcagcgcagaaatcatcgacgtttcccgtggtggtatgcgtgtgcgtctg
ctggagaatggcgcggtagcctttatccctgccccgttcatccacgcggtgcgtgatgag
ctggtgtgttcccaggaaaacggcaccgtacagatcaaaggtgaagtcgtttatcgcgtc
accgatgtgatcgacgtgaccatcgccgaagtgcgtatggaaacgcgtagtgtagtggcg
cgtcctgccagttaa
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